| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733655
Identifier: 187733655
GI number: 187733655
Start: 1347408
End: 1348157
Strand: Reverse
Name: 187733655
Synonym: SbBS512_E1476
Alternate gene names: NA
Gene position: 1348157-1347408 (Counterclockwise)
Preceding gene: 187731880
Following gene: 187732391
Centisome position: 29.21
GC content: 60.27
Gene sequence:
>750_bases GTGGATGCCGTCGTGGCGCTGCCCTTTGCTGCTGACGCCTGTCTGGTCGCCTCATCTTTTGAAGCAGACGCAGATGATGC CGATGACGCCGCCGAACTGGCGGACGATGCGGCAGCCGTTTTTGAGGATTCTGCGCTGGTTTCCGACGCTTTCGCGTTCG TCTCGGATGTCTTCGCTGCGGAAGCAGACCTCGCTGCTGCGCTGGCCTGTTCAGCGGCTTCGCCAGCCTTCGTTGTGGCT GTTGAAGCAGACGATGCAGCACTTTCTGCCGATTTTCCGGCGGCGGTGGCACTGGCTGAGGCCTGCCCGGCACTTGTTGA CGCGGCACTGGCAGATAATGCAGCCGCTGTTTTTGAGTCTGCCGCAGCTGAGGCGCTCTGTCCCGCTGCCGTTTCAGAAG ACCTGGCGTTCGTCTCGGACGTTTTTGCCGCCTTCGCAGAATTTGCTGCCGCCGTTGCCGAGGAAGCTGCGCTGCTGGCG CTCGAGGCTGCGTTCGTTTCTGATGATTTTGCCGCCTCTTTTGAAGCCGACGCATCCCGTGCTGAAGTGGCTGCTTCTGA CGCTTTCGTGGTCGCGGTGGATGCAGAAGTGGCTGCTGATTGTTGTGACGCTGCGGCATTCGTTTCTGACGTTTTCGCGG CACTGGCGCTGGTAGCTGCCGCGCTTTTTGATGACTCTGCAGCAGCAGCACTTTTTGCTGCTTCACGGGCCTTTGTCGAT GCCGTTCCTGCGCTGGAAGACGCTGACTGA
Upstream 100 bases:
>100_bases TGCCCGTTTTGCCGCTGTCTCAGCGCGCGTTGCCGCGGATTCCGCCGTACTTTTGCTCTGAGCTGCCGCCGTCGCACTGC CAGCTGCCTCTGTCGCCTTC
Downstream 100 bases:
>100_bases GCCGACGACGCGGCCTGTCCGGCTGACGTGCTGGCGGCACGTGCTGAGGCTGCAGCATCGGTTGCATGAGTTGCCGCCTC GCTGGCTGATGCACTGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDAVVALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSAASPAFVVA VEADDAALSADFPAAVALAEACPALVDAALADNAAAVFESAAAEALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLA LEAAFVSDDFAASFEADASRAEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVD AVPALEDAD
Sequences:
>Translated_249_residues MDAVVALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSAASPAFVVA VEADDAALSADFPAAVALAEACPALVDAALADNAAAVFESAAAEALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLA LEAAFVSDDFAASFEADASRAEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVD AVPALEDAD >Mature_249_residues MDAVVALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSAASPAFVVA VEADDAALSADFPAAVALAEACPALVDAALADNAAAVFESAAAEALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLA LEAAFVSDDFAASFEADASRAEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVD AVPALEDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24366; Mature: 24366
Theoretical pI: Translated: 2.75; Mature: 2.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVVALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAA CCCEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EADLAAALACSAASPAFVVAVEADDAALSADFPAAVALAEACPALVDAALADNAAAVFES HHHHHHHHHHCCCCCEEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH AAAEALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLALEAAFVSDDFAASFEADASR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHH AEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVD HHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVPALEDAD HHCCCCCCC >Mature Secondary Structure MDAVVALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAA CCCEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EADLAAALACSAASPAFVVAVEADDAALSADFPAAVALAEACPALVDAALADNAAAVFES HHHHHHHHHHCCCCCEEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH AAAEALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLALEAAFVSDDFAASFEADASR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHH AEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVD HHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVPALEDAD HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA