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The map label for this gene is ghrA [H]

Identifier: 187733474

GI number: 187733474

Start: 2085412

End: 2086350

Strand: Reverse

Name: ghrA [H]

Synonym: SbBS512_E2296

Alternate gene names: 187733474

Gene position: 2086350-2085412 (Counterclockwise)

Preceding gene: 187734178

Following gene: 187733012

Centisome position: 45.2

GC content: 51.01

Gene sequence:

>939_bases
ATGGATATCATCTTTTATCACCCAACGTTCGATACCCAATGGTGGATTGAGGCACTGCGCAAAGCTATTCCTCAGGCAAG
AGTCAGAGCATGGAAAAGCGGAGATAATGACTCTGCTGATTATGCTTTAGTCTGGCATCCTCCTGTTGAAATGCTGGCAG
GGCGCGATCTTAAAGCGGTGTTCGCACTCGGGGCCGGTGTTGATTCTATTTTGAGCAAGCTACAGGCACACCCTGAAATG
CTGAACCCTTCTGTTCCACTTTTTCGCCTGGAAGATACTGGTATGGGCGAGCAAATGCAGGAATATGCTGTCAGTCAGGT
GCTGCATTGGTTTCGACGTTTTGACGATTATCGCATCCAGCAAAATAGTTCGCATTGGCAACCGCTGCCTGAATATCATT
GGGAAGATTTTACCATCGGCATTTTGGGCGCAGGCGTACTGGGCAGTAAAGTTGCTCAGAGTCTGCAAACCTGGCGCTTT
CCGCTGCGTTGCTGGAGTCGAACCCGTAAATCGTGGCCTGGCGTGCAAAGCTTTGCCGGACGGGAAGAACTGTCTGCATT
TCTGAGCCAATGTCGGGTATTGATTAATTTGTTACCGAATACCCCTGAAACCGTCGGCATTATTAATCAACAATTACTCG
AAAAATTACCGGATGGCGCGTATCTCCTCAACCTGGCGCGTGGTGTTCATGTTGTGGAAGATGACCTGCTCGCGGCGCTG
GATAGCGGCAAAGTTAAAGGCGCAATGTTGGATGTTTTTAATCGTGAACCCTTACCGCCTGAAAGTCCGCTCTGGCAACA
TCCACGCGTGACGATAACACCACATGTCGCCGCGATTACCCGTCCCGCTGAAGCTGTGGAGTACATTTCTCGCACCATTG
CCCAGCTCGAAAAAGGGGAGAGGGTCTGCGGGCAAGTCGACCGCGCACGCGGCTACTAA

Upstream 100 bases:

>100_bases
CTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCAC
AACGCTTTTCGGGAGTCAGT

Downstream 100 bases:

>100_bases
TAAAGCATCAGGATTCCTGCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCA
TACCGTTGCCAGCACACATG

Product: D-isomer specific 2-hydroxyacid dehydrogenase family protein

Products: NA

Alternate protein names: 2-ketoacid reductase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEM
LNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL
DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY

Sequences:

>Translated_312_residues
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEM
LNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL
DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY
>Mature_312_residues
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEM
LNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL
DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY

Specific function: Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively [H]

COG id: COG0111

COG function: function code HE; Phosphoglycerate dehydrogenase and related dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrA subfamily [H]

Homologues:

Organism=Homo sapiens, GI6912396, Length=237, Percent_Identity=28.2700421940928, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI23308577, Length=261, Percent_Identity=26.8199233716475, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI87081824, Length=312, Percent_Identity=99.6794871794872, Blast_Score=640, Evalue=0.0,
Organism=Escherichia coli, GI87082289, Length=258, Percent_Identity=27.1317829457364, Blast_Score=75, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17532191, Length=263, Percent_Identity=28.1368821292776, Blast_Score=74, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6324964, Length=212, Percent_Identity=25.9433962264151, Blast_Score=73, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6324980, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320925, Length=199, Percent_Identity=24.6231155778894, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322116, Length=199, Percent_Identity=24.6231155778894, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324055, Length=179, Percent_Identity=29.0502793296089, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574286, Length=263, Percent_Identity=30.0380228136882, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI45552429, Length=243, Percent_Identity=26.3374485596708, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24585514, Length=243, Percent_Identity=26.3374485596708, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28574282, Length=243, Percent_Identity=26.3374485596708, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI45551003, Length=243, Percent_Identity=26.3374485596708, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28574284, Length=243, Percent_Identity=26.3374485596708, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24585516, Length=235, Percent_Identity=27.6595744680851, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI19921140, Length=170, Percent_Identity=31.7647058823529, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006140
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02826 2-Hacid_dh_C [H]

EC number: =1.1.1.79; =1.1.1.81 [H]

Molecular weight: Translated: 35374; Mature: 35374

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00671 D_2_HYDROXYACID_DH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAV
CCEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCCHHHH
FALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQ
HHHHCCHHHHHHHHHHCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHCC
QNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAG
CCCCCCCCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
REELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGE
HCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHH
RVCGQVDRARGY
HHHHHHHHHCCC
>Mature Secondary Structure
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAV
CCEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCCHHHH
FALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQ
HHHHCCHHHHHHHHHHCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHCC
QNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAG
CCCCCCCCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
REELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGE
HCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHH
RVCGQVDRARGY
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA