Click here to switch to the map view.

The map label for this gene is 187733412

Identifier: 187733412

GI number: 187733412

Start: 255537

End: 255845

Strand: Direct

Name: 187733412

Synonym: SbBS512_E0250

Alternate gene names: NA

Gene position: 255537-255845 (Clockwise)

Preceding gene: 187733925

Following gene: 187731774

Centisome position: 5.54

GC content: 48.87

Gene sequence:

>309_bases
ATGTCTGGAAATATAGGGGCAAATCCAGGAGCGTTCTGGCTCGTTTTGCTGATCATCGCAGGTTGGGGCGGTCTGGTCCG
CTACCTGATAGATGTGAAGCAGAGTAAAGCAACGTGGAGTTGGATAAATGCTCTGGCTCAGATAGTGGTATCAGGATTCA
CCGGTGTTATTGGTGGCCTGATCAGCATCGAAAGTGGATTCAGTATTTACATGATTCTCGCGACAGCGGGGATTAGTGGT
GCGATGGGTTCGGTTGCACTGACGTACTTCTGGGAACGACTGACAGGGGTGAAAAATGCAAAATCTTAA

Upstream 100 bases:

>100_bases
TCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGT
AATGGGTTAAGTGATAACAG

Downstream 100 bases:

>100_bases
TCCTCAGCGTAAAGCTTTCCTCGATATGGTGGCATGGTCAGAAGGAACGGATAACGGGCGACAACCGACACGTAACCACG
GTTATGATATTATTGTCGGT

Product: gp13

Products: NA

Alternate protein names: Holin Protein

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSGNIGANPGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGLISIESGFSIYMILATAGISG
AMGSVALTYFWERLTGVKNAKS

Sequences:

>Translated_102_residues
MSGNIGANPGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGLISIESGFSIYMILATAGISG
AMGSVALTYFWERLTGVKNAKS
>Mature_101_residues
SGNIGANPGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGLISIESGFSIYMILATAGISGA
MGSVALTYFWERLTGVKNAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10726; Mature: 10595

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNIGANPGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGL
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISIESGFSIYMILATAGISGAMGSVALTYFWERLTGVKNAKS
HHHCCCCEEEHHEEHHCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGNIGANPGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGL
CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISIESGFSIYMILATAGISGAMGSVALTYFWERLTGVKNAKS
HHHCCCCEEEHHEEHHCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA