Click here to switch to the map view.

The map label for this gene is ugpC [H]

Identifier: 187733368

GI number: 187733368

Start: 1947930

End: 1948205

Strand: Direct

Name: ugpC [H]

Synonym: SbBS512_E2140

Alternate gene names: 187733368

Gene position: 1947930-1948205 (Clockwise)

Preceding gene: 187731014

Following gene: 187734041

Centisome position: 42.2

GC content: 43.12

Gene sequence:

>276_bases
ATGGCCGCGGTAATTCTACGCAAAGTTGAAAAAATTTATGACAATGGATTCAAACCTGTTCACGGCATTGATCTCGATAT
AAACGATGGTGAATTCATGGTTTTTGTTGGACCATCTGGGTGTGCCAAATCAACTACATTACGCATGATTGCAGGTCTTG
AAGACGTATCAGGTGGTGAAATTTACATTAGCGACCGCCTTGTTAATACCCTTCCGCCTAAAGATCGCAGCATTGCAATG
GTGTTCCAGAACTATGCGCTGTATGAGGTAGCCTGA

Upstream 100 bases:

>100_bases
GTAGCACCATGTAAATAGTTATTTTTAGCACTCCACTATTCAACATTCGTTGAATAGTGGAGTATCAGTATTCCAAAATT
CTTGTTAATGAGAGCAGATT

Downstream 100 bases:

>100_bases
GTTTAACGGACACTCCTTCCTGAAATAGAATGGCATCAGAAGGAGCTAATAATGAGCAGAAAAAACCAACGTTACTCTAA
AGAGTTCAAAGCCGAAGCTG

Product: ABC ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MAAVILRKVEKIYDNGFKPVHGIDLDINDGEFMVFVGPSGCAKSTTLRMIAGLEDVSGGEIYISDRLVNTLPPKDRSIAM
VFQNYALYEVA

Sequences:

>Translated_91_residues
MAAVILRKVEKIYDNGFKPVHGIDLDINDGEFMVFVGPSGCAKSTTLRMIAGLEDVSGGEIYISDRLVNTLPPKDRSIAM
VFQNYALYEVA
>Mature_90_residues
AAVILRKVEKIYDNGFKPVHGIDLDINDGEFMVFVGPSGCAKSTTLRMIAGLEDVSGGEIYISDRLVNTLPPKDRSIAMV
FQNYALYEVA

Specific function: Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87082267, Length=88, Percent_Identity=56.8181818181818, Blast_Score=107, Evalue=2e-25,
Organism=Escherichia coli, GI1790467, Length=88, Percent_Identity=52.2727272727273, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1787370, Length=85, Percent_Identity=43.5294117647059, Blast_Score=78, Evalue=1e-16,
Organism=Escherichia coli, GI1787712, Length=86, Percent_Identity=44.1860465116279, Blast_Score=78, Evalue=1e-16,
Organism=Escherichia coli, GI87081791, Length=83, Percent_Identity=43.3734939759036, Blast_Score=68, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=85, Percent_Identity=42.3529411764706, Blast_Score=67, Evalue=2e-13,
Organism=Escherichia coli, GI1788761, Length=69, Percent_Identity=43.4782608695652, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR017922
- InterPro:   IPR008995
- InterPro:   IPR013611 [H]

Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]

EC number: =3.6.3.20 [H]

Molecular weight: Translated: 9997; Mature: 9865

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVILRKVEKIYDNGFKPVHGIDLDINDGEFMVFVGPSGCAKSTTLRMIAGLEDVSGGE
CHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHHEEEEECCCCCCCCE
IYISDRLVNTLPPKDRSIAMVFQNYALYEVA
EEEECEEECCCCCCCCEEEEEEECEEEEEEC
>Mature Secondary Structure 
AAVILRKVEKIYDNGFKPVHGIDLDINDGEFMVFVGPSGCAKSTTLRMIAGLEDVSGGE
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHHEEEEECCCCCCCCE
IYISDRLVNTLPPKDRSIAMVFQNYALYEVA
EEEECEEECCCCCCCCEEEEEEECEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA