| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733303
Identifier: 187733303
GI number: 187733303
Start: 1241804
End: 1241941
Strand: Direct
Name: 187733303
Synonym: SbBS512_E1363
Alternate gene names: NA
Gene position: 1241804-1241941 (Clockwise)
Preceding gene: 187733184
Following gene: 187731679
Centisome position: 26.9
GC content: 42.03
Gene sequence:
>138_bases TTGACCACTTCAGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAGCGAGA TATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA
Upstream 100 bases:
>100_bases ATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCT AACTCGGTGGCCAGTTTTTG
Downstream 100 bases:
>100_bases TCGAACAATGGCGACAACAATTTCCCATTGAAGCGATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGG GTACAGCATGAACCCTCAGA
Product: transposase family
Products: NA
Alternate protein names: ISO-S3 11 kDa protein [H]
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MTTSVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
Sequences:
>Translated_45_residues MTTSVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR >Mature_44_residues TTSVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 5181; Mature: 5050
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTSVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]