The gene/protein map for NC_010658 is currently unavailable.
Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is 187733290

Identifier: 187733290

GI number: 187733290

Start: 1867035

End: 1867274

Strand: Direct

Name: 187733290

Synonym: SbBS512_E2055

Alternate gene names: NA

Gene position: 1867035-1867274 (Clockwise)

Preceding gene: 187731065

Following gene: 187732809

Centisome position: 40.45

GC content: 49.17

Gene sequence:

>240_bases
TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCCTCCAGCCCATGCCAGAAACATCAATACTGCATCGCCAATAAATACACCGCAGGCCGCAAGATAA

Upstream 100 bases:

>100_bases
CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG
GCGGTGTAAGTGAACTGTAG

Downstream 100 bases:

>100_bases
CCGCCTTTCATACCGCTACTGACGCTATTTTTGAGTACAAACAGGGTATTTGGCCCAGGCACCAACACAATAAAAATGGC
CCCAACCAGATTAATGCCGA

Product: putative IS1 encoded protein

Products: NA

Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPPAHARNINTASPINTPQAAR

Sequences:

>Translated_79_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPPAHARNINTASPINTPQAAR
>Mature_78_residues
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPPAHARNINTASPINTPQAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8301; Mature: 8170

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPP
CCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AHARNINTASPINTPQAAR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPP
CCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AHARNINTASPINTPQAAR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA