Click here to switch to the map view.

The map label for this gene is frvR [H]

Identifier: 187733288

GI number: 187733288

Start: 4089593

End: 4090036

Strand: Reverse

Name: frvR [H]

Synonym: SbBS512_E4379

Alternate gene names: 187733288

Gene position: 4090036-4089593 (Counterclockwise)

Preceding gene: 187732331

Following gene: 187732413

Centisome position: 88.61

GC content: 48.42

Gene sequence:

>444_bases
TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCTCGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCAAAACCTGATTGTTAATCGCCTCGCCATCCCACATTGCTGGAGCGAACAGGAGCGACGTTTTCGT
GGATTTTTTATTACCCTCGCCCAACCAGTTGAGGTGAATAACGAAGTCATTAACCATGTCTTGATCGCCTGCGCCGCCGC
CGATGCGCGTCATGAGCTAAAAATATTTAGCTATCTGGCAAGCATATTGTGTCAGCATCCGGCAGAGGTTATTGCCGGGT
TAACAGGATATGAGGCATTTATGGAGTTACTTCACAAGGGGTGA

Upstream 100 bases:

>100_bases
CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG
GCGGTGTAAGTGAACTGTAG

Downstream 100 bases:

>100_bases
ACTGTGTCGGATGCGCCGCATCCGACACTGCATTTATCATCAAGAACGTTTAACGCAGGCTATTATAGTCATCAACCATT
TCGTTGTACTCGCGTAATGC

Product: transposase

Products: NA

Alternate protein names: Putative phosphotransferase EIIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSLASTLKSPSYTKSVSWQHYQNLIVNRLAIPHCWSEQERRFR
GFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVIAGLTGYEAFMELLHKG

Sequences:

>Translated_147_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSLASTLKSPSYTKSVSWQHYQNLIVNRLAIPHCWSEQERRFR
GFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVIAGLTGYEAFMELLHKG
>Mature_146_residues
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSLASTLKSPSYTKSVSWQHYQNLIVNRLAIPHCWSEQERRFRG
FFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVIAGLTGYEAFMELLHKG

Specific function: Could be involved in the regulation of the transcription of the FRV operon [H]

COG id: COG1762

COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIA type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790331, Length=89, Percent_Identity=97.752808988764, Blast_Score=187, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF00359 PTS_EIIA_2 [H]

EC number: NA

Molecular weight: Translated: 16138; Mature: 16006

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSLASTLKSPSYTKSVSWQHYQN
CCCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA
HHHHHHCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
SILCQHPAEVIAGLTGYEAFMELLHKG
HHHHHCHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSLASTLKSPSYTKSVSWQHYQN
CCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA
HHHHHHCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
SILCQHPAEVIAGLTGYEAFMELLHKG
HHHHHCHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 8019415 [H]