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The map label for this gene is trpH [H]

Identifier: 187733133

GI number: 187733133

Start: 1360110

End: 1360970

Strand: Direct

Name: trpH [H]

Synonym: SbBS512_E1490

Alternate gene names: 187733133

Gene position: 1360110-1360970 (Clockwise)

Preceding gene: 187730591

Following gene: 187733520

Centisome position: 29.47

GC content: 53.89

Gene sequence:

>861_bases
GTGATTTACGACCTGCACAGCCATACCACAGCTTCCGATGGCTGCCTGACGCCAGAAGCATTGGTGCACCGTGCAGTCGA
GATGCGCGTCGGCACCCTGGCGATCACCGACCATGACACCACAGCTGCAATCGCGCCAGCAAGAGAGGAAATTTCACGTT
CGGGACTGGCGCTGAATCTTATTCCCGGCGTGGAAATTTCCACGGTCTGGGAAAATCATGAAATTCATATTGTCGGGCTG
AATATTGATATTACTCATCCGCTAATGTGTGAGTTCCTCGCGCAGCAGACAGAACGGCGCAATCAGCGGGCGCAGCAAAT
TGCCGAAAGACTTGAAAAAGCGCAAATACCTGGGGCGCTGGAAGGCGCACAACGACTGGCGCAGGGCGGCGCAGTGACGC
GCGGTCATTTTGCGCGTTTCCTTGTTGAGTGCGGCAAAGCCAGTTCAATGGCAGATGTCTTTAAAAAGTATCTGGCGCGC
GGGAAAACCGGATACGTTTCGCCACAGTGGTGTACAATAGAACAAGCTATTGATGTCATTCATCATTCTGGCGGTAAGGC
GGTGCTAGCTCATCCTGGGCGGTACAATCTTAGTGCTAAATGGCTGAAAAGATTGGTTGCGCATTTTGCCGAACACCACG
GCGACGCGATGGAAGTCGCGCAGTGCCAGCAATCGCCCAATGAACGCACCCAGTTGACGACACTTGCGCGTCAGCATCAT
TTATGGGCATCACAAGGATCTGATTTTCATCAGCCATGCCCGTGGATCGAACTGGGTCGTAAACTCTGGCTGCCCGCAGG
CGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGA

Upstream 100 bases:

>100_bases
TCAACAGCTGATTTCAGAATATTTGCCAGAACCGTTATGATGTCGGCGCAAAAAACATTATCCAGAACGGGAGTGCGCCT
TGAGCGACACGAATTACGCA

Downstream 100 bases:

>100_bases
GCCAGTTTTTTTATATTCATCCTGATAACCCGCAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGG
GTGATTGTTTATCCAACTGA

Product: putative phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGL
NIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLAR
GKTGYVSPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLTTLARQHH
LWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL

Sequences:

>Translated_286_residues
MIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGL
NIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLAR
GKTGYVSPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLTTLARQHH
LWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL
>Mature_286_residues
MIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGL
NIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLAR
GKTGYVSPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLTTLARQHH
LWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=286, Percent_Identity=98.2517482517483, Blast_Score=581, Evalue=1e-167,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31895; Mature: 31895

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNL
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHHCCCHHHHHHCCCEEEE
IPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGAL
CCCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVSPQWCTIEQAIDVI
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHH
HHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLTTLARQHH
HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
LWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL
HHHCCCCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNL
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHHCCCHHHHHHCCCEEEE
IPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGAL
CCCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVSPQWCTIEQAIDVI
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHH
HHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLTTLARQHH
HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
LWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL
HHHCCCCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]