Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is iraP [H]

Identifier: 187733120

GI number: 187733120

Start: 293549

End: 293809

Strand: Direct

Name: iraP [H]

Synonym: SbBS512_E0299

Alternate gene names: 187733120

Gene position: 293549-293809 (Clockwise)

Preceding gene: 187731940

Following gene: 187733634

Centisome position: 6.36

GC content: 44.44

Gene sequence:

>261_bases
ATGAAAAATCTCATTGCTGAGTTGTTATTAAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGCGCGCAGGTAGA
AGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCACAAAATGACCAACAGCGCTTGATTGAACAGGTGGATG
GGGCTCTTTACGAGGTAAAGCCTGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCAATTATGTAAAGAAGTTA
TTGAAGCATCCTCGTCAGTAA

Upstream 100 bases:

>100_bases
GCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACG
TTGGATAAGGAAATACAGAC

Downstream 100 bases:

>100_bases
AAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTTATAGTCGCTTTGTTTTTATTTTTTAATGTAT
TTGTACATGGAGAAAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKL
LKHPRQ

Sequences:

>Translated_86_residues
MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKL
LKHPRQ
>Mature_86_residues
MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKL
LKHPRQ

Specific function: Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS especially during phosphate starvation, but also in stationary phase and during nitrogen starvation. Its effect on RpoS stability is du

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iraP family [H]

Homologues:

Organism=Escherichia coli, GI1786581, Length=86, Percent_Identity=95.3488372093023, Blast_Score=165, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019732 [H]

Pfam domain/function: PF10796 Anti-adapt_IraP [H]

EC number: NA

Molecular weight: Translated: 9903; Mature: 9903

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVK
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCC
PDASIPDDDTELLRNYVKKLLKHPRQ
CCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVK
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCC
PDASIPDDDTELLRNYVKKLLKHPRQ
CCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA