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The map label for this gene is ybjM

Identifier: 187733109

GI number: 187733109

Start: 2284029

End: 2284406

Strand: Reverse

Name: ybjM

Synonym: SbBS512_E2484

Alternate gene names: 187733109

Gene position: 2284406-2284029 (Counterclockwise)

Preceding gene: 187730046

Following gene: 187730603

Centisome position: 49.49

GC content: 48.94

Gene sequence:

>378_bases
GTGAAACATAAACAACGTTGGGCGGGGGCAATCTGCTGTTTTGTCCTCTTCATTGTGGTGTGCCTTTTTCTGGCGACGCA
CATGAAAGGCGCTTTTCGGGCTGCCGGGCATCCTGAAATCGGCTTGCTGTTTTTCATTCTTCCTGGAGCAGTTGCCAGTT
TCTTTTCACAGCGTAGAGAAGTCCTGAAACCTCTATTTGGCGCAATGCTGGCGGCACCCTGTTCAATGCTCATTATGCGG
CTGTTTTTTTCACCGACGCGCTCATTCTGGCAAGAGCTGGCATGGTTACTAAGCGCGGTGTTCTGGTGTGCGCTGGGGGC
ACTGTGTTTCTTATTTATCAGTAGTTTGTTTAAACCACAGCACAGAAAAAATCAGTAA

Upstream 100 bases:

>100_bases
GCGTTGGCCTATATTAGCATGGAATGCGAAGCGGCTTTATCTTACTGAACGCCACACTGGCGAAAAATGTGTTCGATAGA
CGCAGTGTCAGGAGGAACGA

Downstream 100 bases:

>100_bases
AGCCCTCAACGCGAGGGCTTGTCAGACGATCAGGCGTCCAGATTTTCTTTCACCCATGCAGCAAAATCGGTATAGCCGCC
GATATGTTGCTGATCGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMR
LFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQHRKNQ

Sequences:

>Translated_125_residues
MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMR
LFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQHRKNQ
>Mature_125_residues
MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMR
LFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQHRKNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787072, Length=125, Percent_Identity=100, Blast_Score=249, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBJM_ECO57 (P64440)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D85595
- PIR:   H90744
- RefSeq:   NP_286614.1
- RefSeq:   NP_308955.1
- ProteinModelPortal:   P64440
- EnsemblBacteria:   EBESCT00000028322
- EnsemblBacteria:   EBESCT00000057797
- GeneID:   917668
- GeneID:   958194
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1075
- KEGG:   ecs:ECs0928
- GeneTree:   EBGT00050000009964
- HOGENOM:   HBG416423
- OMA:   FWQELAY
- ProtClustDB:   CLSK879792
- BioCyc:   ECOL83334:ECS0928-MONOMER
- InterPro:   IPR020368
- ProDom:   PD079046

Pfam domain/function: PF11045 YbjM

EC number: NA

Molecular weight: Translated: 14203; Mature: 14203

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f517a88)-; HASH(0x1f280a98)-; HASH(0x1f530794)-; HASH(0x1b39f7f4)-;

Cys/Met content:

4.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HRKNQ
CCCCH
>Mature Secondary Structure
MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HRKNQ
CCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796