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The map label for this gene is slp

Identifier: 187732961

GI number: 187732961

Start: 1879044

End: 1879625

Strand: Reverse

Name: slp

Synonym: SbBS512_E2066

Alternate gene names: 187732961

Gene position: 1879625-1879044 (Counterclockwise)

Preceding gene: 187732268

Following gene: 187733670

Centisome position: 40.72

GC content: 53.44

Gene sequence:

>582_bases
ATGGCGGTTCAAAAGAATGTTATCAAAGGCATACTGGCAGGTACGTTTGCGCTAATGCTGAGCGGTTGTGTCACTGTGCC
GGACGCCATTAAAGGCAGCAGTCCCACGCCGCAACAAGATTTAGTTCGGGTGATGAGTGCGCCGCAGCTGTACGTTGGTC
AGGAGGCACGCTTTGGTGGCAAAGTGGTTGCGGTACAAAACCAGCAAGGGAAAACCCGCCTGGAAATTGCTACCGTACCG
CTGGACAGCGGAGCCAGACCGACGCTGGGAGAACCTTCTCGCGGTCGCATTTATGCCGATGTGAACGGTTTTCTGGACCC
GGTGGATTTCCGTGGACAACTGGTTACGGTAGTCGGGCCAATCACTGGTGCGGTTGACGGCAAAATCGGCAATACGCCCT
ATAAATTTATGGTGATGCAAGTAACGGGTTACAAACGTTGGCATTTAACCCAGCAGGTGATTATGCCGCCTCAGCCGATT
GATCCATGGTTTTATGGCGGTCGTGGCTGGCCCTATGACTACGGCGGATGGGGCTGGTATAATCCCGGTCCCGCGAGAGT
ACAAACAGTTGTAACTGAATAA

Upstream 100 bases:

>100_bases
TGCCGAACCGGTTTATTTACGTAACAACGTCGCATGGAAGAAACTTCCGGGCAAAGAATGAATCTTAAGAGTATGCCCTG
AGAAAAAAAGGAGTCGCATC

Downstream 100 bases:

>100_bases
TTGCTTGTTTTTAAAGAAAAAGAAACAGCGGCTGGTCCGCTGTTTCTGCATTCTTACGGTAAAGATAAAAATAAATAGTG
ACGAGCTTCGCAACCTTTTC

Product: outer membrane protein Slp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVP
LDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
DPWFYGGRGWPYDYGGWGWYNPGPARVQTVVTE

Sequences:

>Translated_193_residues
MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVP
LDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
DPWFYGGRGWPYDYGGWGWYNPGPARVQTVVTE
>Mature_192_residues
AVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPL
DSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPID
PWFYGGRGWPYDYGGWGWYNPGPARVQTVVTE

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=193, Percent_Identity=99.4818652849741, Blast_Score=386, Evalue=1e-109,
Organism=Escherichia coli, GI87082278, Length=175, Percent_Identity=41.7142857142857, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20979; Mature: 20848

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCC
KVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGP
EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
ITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYDYGGWGWY
CCCCCCCCCCCCCEEEEEEEECCCEEEECCCEECCCCCCCCCCEECCCCCCCCCCCCCCC
NPGPARVQTVVTE
CCCCCEEEEEECC
>Mature Secondary Structure 
AVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCC
KVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGP
EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
ITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYDYGGWGWY
CCCCCCCCCCCCCEEEEEEEECCCEEEECCCEECCCCCCCCCCEECCCCCCCCCCCCCCC
NPGPARVQTVVTE
CCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]