| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yuaK [H]
Identifier: 187732924
GI number: 187732924
Start: 1994741
End: 1995916
Strand: Reverse
Name: yuaK [H]
Synonym: SbBS512_E2196
Alternate gene names: 187732924
Gene position: 1995916-1994741 (Counterclockwise)
Preceding gene: 187733251
Following gene: 187733233
Centisome position: 43.24
GC content: 52.64
Gene sequence:
>1176_bases GTGGTACGCCGTCTGCGTTTCTCCGGTCCTAAGACATCAATCATCTGTACTCCAATGACTAGTCTAAAAACTAGTATTAA GACTATCACTTATTTAAGTGATACTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATCAGTAAGTTGGAGTCATTACCCG CCGACTGCCTGGAATTTATCTGGTCGTTACCCGAAAATTCTGTTGACCTGATAGTCACGGACCCGCCGTACTTTAAAGTG AAGCCTGAGGGCTGGGATAACCAGTGGAAGGGCGACGATGATTACCTGAAGTGGCTGGACCAGTGTCTGGCGCAGTTCTG GCGGGTGCTGAAACCTGCCGGAAGTCTTTACCTGTTCTGTGGTCATCGCCTGGCATCTGATATCGAAATCATGATGCGTG AACGCTTCAGTGTGCTGAACCATATTATCTGGGCGAAGCCGTCCGGACGCTGGAACGGATGCAACAAGGAAAGCCTGCGG GCGTATTTCCCCGCCACAGAGCGCATTCTGTTCGCGGAACATTATCAGGGGCCGTATCGTCCGAAAGATGCCGGGTATGC GGCGAAGGGCAGTGCACTGAAACAGCATGTGATGGCCCCGCTGATTTCTTACTTTCGTGATGCGCGAGCTGCCCTGGGGA TAACGGCAAAACAGATTGCAGATGCCACAGGAAAGAAAAACATGGTGTCGCACTGGTTCAGTGCCAGTCAGTGGCAGTTG CCGAATGAAAGCGATTATCTGAAATTACAGGCGCTGTTTGCCCGGGTGGCAGAAGAGAAGCATCGGCGTGGTGAACTGGA AAAGCTCCACCACCAGCTGGTGGATACGTATACCTCACTGAACCGGCAGTATGCGGAGCTGCTGAGTGAATATAAACATC TGCGGCGGTATTTTGGCGTGACGGTGCAGGTGCCGTATACCGATGTGTGGACGCATAAACCGGTGCAGTTCTATCCCGGG AAACATCCGTGCGAAAAACCGGCAGAAATGCTGCAGCAGATAATCAGCGCTGGCAGTCGTCCGGGTGACCTGATTGCAGA TTTTTTCATGGGGTCGGGTTCGACAGTGAAAGCGGCACTGGCGCTCGGGCGTCGTGCAATTGGCGTTGAGCTGGAGACTG AACGTTTTGAGCAGACGGTTCGGGAAGTACAGGATTTAGTCAGCCAGAACGGATGA
Upstream 100 bases:
>100_bases GAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAA CAATTGCGATCTTTTCCTGT
Downstream 100 bases:
>100_bases TATTGAAGAATTAATTACGAGTCGTTATTATGCGGCTCCCGGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATC GCCAGGTCGCTGGTTCAAAT
Product: DNA methylase
Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFIWSLPENSVDLIVTDPPYFKV KPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLR AYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPG KHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG
Sequences:
>Translated_391_residues MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFIWSLPENSVDLIVTDPPYFKV KPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLR AYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPG KHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG >Mature_391_residues MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFIWSLPENSVDLIVTDPPYFKV KPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLR AYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPG KHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 44543; Mature: 44543
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFI CCCCEECCCCCCEEEECCHHHHHHHHHHHEEECCCCEEEECCHHHHHHHHHCCHHHHHHH WSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFC HHCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE GHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHEEEHHHCCCCCC PKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCC PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGV CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAAL EEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH ALGRRAIGVELETERFEQTVREVQDLVSQNG HHCCHHHCCEECHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFI CCCCEECCCCCCEEEECCHHHHHHHHHHHEEECCCCEEEECCHHHHHHHHHCCHHHHHHH WSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFC HHCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE GHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHEEEHHHCCCCCC PKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCC PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGV CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAAL EEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH ALGRRAIGVELETERFEQTVREVQDLVSQNG HHCCHHHCCEECHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]
Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA