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The map label for this gene is insD1 [C]

Identifier: 187732883

GI number: 187732883

Start: 4069481

End: 4069678

Strand: Reverse

Name: insD1 [C]

Synonym: SbBS512_E4353

Alternate gene names: 187732883

Gene position: 4069678-4069481 (Counterclockwise)

Preceding gene: 187734154

Following gene: 187733553

Centisome position: 88.16

GC content: 48.99

Gene sequence:

>198_bases
GTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGC
GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTT
GTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG

Upstream 100 bases:

>100_bases
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTA
CCGGAATAGCAGAGAGCTTC

Downstream 100 bases:

>100_bases
GGGCAAATCCAACAATATCAATTACGTCCTGTGGCCGACTAATTGAATAAGTTGCAGGACTGGTGATTTGACTCATCGCA
GTGTCCTTTTTAATTGTTGT

Product: insertion sequence 2 OrfB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

Sequences:

>Translated_65_residues
MKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>Mature_65_residues
MKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=65, Percent_Identity=98.4615384615385, Blast_Score=139, Evalue=3e-35,
Organism=Escherichia coli, GI1789424, Length=65, Percent_Identity=98.4615384615385, Blast_Score=139, Evalue=3e-35,
Organism=Escherichia coli, GI1789224, Length=65, Percent_Identity=98.4615384615385, Blast_Score=139, Evalue=3e-35,
Organism=Escherichia coli, GI1788305, Length=65, Percent_Identity=98.4615384615385, Blast_Score=139, Evalue=3e-35,
Organism=Escherichia coli, GI1787669, Length=65, Percent_Identity=98.4615384615385, Blast_Score=139, Evalue=3e-35,
Organism=Escherichia coli, GI1786558, Length=65, Percent_Identity=98.4615384615385, Blast_Score=139, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 7578; Mature: 7578

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDN
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
RCLEI
CEECC
>Mature Secondary Structure
MKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDN
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
RCLEI
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA