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The map label for this gene is ydiN [H]

Identifier: 187732868

GI number: 187732868

Start: 1734990

End: 1735409

Strand: Direct

Name: ydiN [H]

Synonym: SbBS512_E1894

Alternate gene names: 187732868

Gene position: 1734990-1735409 (Clockwise)

Preceding gene: 187731244

Following gene: 187732328

Centisome position: 37.59

GC content: 43.57

Gene sequence:

>420_bases
TTGGAGTCATTACCTGCACTGGCAACAATAACAGCAGCCATTATCTATCTGTACCCTTCTCCACTGGTGTGTAATGCCGG
CGCCTTTGTTATCGGTTTCTCAGCAGCTGGCGGCATTTTACAGCTCGGTGTTTCGGTCATGTCAGAGTTTTTCCCAAAAA
GCAAAGCCAAAGTCACCAGTATTTATATGATGATGGGTGGACTGGCTAACTTTGTTATTCCGCTGATTACCGGTTATCTG
TCGAACATCGGCCTTCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTT
TATCCGCTATTACCGCGTTTTTATTATTCCTGAGAATGATGTGCGGTTTGGCGAGCGTAAATTTAGCACCCGGTTAAACA
CAATTAAGCATAGAGGTTAA

Upstream 100 bases:

>100_bases
CTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAA
CATAAAACACTATCAGTAAG

Downstream 100 bases:

>100_bases
AGGAGTTAATTATGGATGTTACCGCAAAATACGAATTGATTGGGCTGATGGCCTATCCTATCCGCCACAGTTTATCGCCT
GAAATGCAGAATAAAGCCTT

Product: transporter, major facilitator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MESLPALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYL
SNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFSTRLNTIKHRG

Sequences:

>Translated_139_residues
MESLPALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYL
SNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFSTRLNTIKHRG
>Mature_139_residues
MESLPALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYL
SNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFSTRLNTIKHRG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI226510946, Length=134, Percent_Identity=99.2537313432836, Blast_Score=266, Evalue=3e-73,
Organism=Escherichia coli, GI1787981, Length=95, Percent_Identity=40, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 15280; Mature: 15280

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLPALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTS
CCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH
IYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPEND
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
VRFGERKFSTRLNTIKHRG
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESLPALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTS
CCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH
IYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPEND
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
VRFGERKFSTRLNTIKHRG
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]