| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is wecF
Identifier: 187732674
GI number: 187732674
Start: 3849071
End: 3850150
Strand: Reverse
Name: wecF
Synonym: SbBS512_E4128
Alternate gene names: 187732674
Gene position: 3850150-3849071 (Counterclockwise)
Preceding gene: 187731867
Following gene: 187732214
Centisome position: 83.41
GC content: 52.59
Gene sequence:
>1080_bases ATGACTGTACTGATTCACGTACTGGGATCGGATATCCCTCACCATAACCGAACCGTTTTGCGGTTTTTCAATGACGCGCT GGCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTT CTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGATTT TTTTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCA TATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCGCTACGTCGCCTGGCGCAAA AGCGAGTCGGCTGTGTATTTGCCACCCGCGGTGATTTGAGCTTTTTTGCCAAAACGCATCCAAAGGTGCGGGGCGAACTG CTGTACTTCCCGACGCGGATGGACCCTTCTCTCAATACGATGGCGAACGATCGGCAACGTGAAGGGAAAATGACCATTCT GGTGGGGAACTCCGGTGACCGCAGCAATGACCATATTGCTGCCTTGCGCGCCGTTCATCAGCAATTTGGCGATACGGTAA AAGTGGTGGTGCCGATGGGATATCCGCCTAATAACGAAGCGTACATTGAGGAAGTTCGTCAGGCGGGGCTGGAGTTATTC AGCGAAGAAAATCTGCAAATTTTGAGCGAAAAACTGGAATTTGACGCCTATCTGGCGCTACTTCGTCAGTGCGATCTTGG TTACTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTTTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACC GGGAAAATCCGTTCTGGCAGGATATGACGGAACAGCATTTGCCGGTGCTGTTTACTACCGACGATCTCAACGAGGATATT GTGCGTGAAGCGCAGCGCCAGTTGGCGTCGGTGGATAAAAACACCATTGCCTTCTTTAGCCCTAACTATCTACAAGGCTG GCAGCGGGCGTTGGCGATTGCCGCCGGGGAGGTCGCATGA
Upstream 100 bases:
>100_bases CTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTT TTACTCTGGCGTAGGCGGGC
Downstream 100 bases:
>100_bases GTCTGCTGCAATTCAGTGGCCTGTTTGTGGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACTTGGTTTGAGTTT CGCCGTGTGCGCTTTAACTT
Product: 4-alpha-L-fucosyltransferase
Products: NA
Alternate protein names: TDP-Fuc4NAc:lipid II Fuc4NAc transferase; Fuc4NAc transferase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRF FFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF SEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDI VREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA
Sequences:
>Translated_359_residues MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRF FFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF SEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDI VREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA >Mature_358_residues TVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFF FHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELL YFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELFS EENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIV REAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA
Specific function: Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 56 family [H]
Homologues:
Organism=Escherichia coli, GI48994971, Length=359, Percent_Identity=99.1643454038997, Blast_Score=741, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009993 [H]
Pfam domain/function: PF07429 Fuc4NAc_transf [H]
EC number: NA
Molecular weight: Translated: 40543; Mature: 40412
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPG CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCC KKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGL HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHEEEEECCCHHHHHCCCC RYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLYFPTRMDPSLNTMANDRQR EEEEHHHHHHHHHHHHCEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCHHC EGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH SEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQ CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEECCCCCCHH DMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA HHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPG EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCC KKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGL HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHEEEEECCCHHHHHCCCC RYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLYFPTRMDPSLNTMANDRQR EEEEHHHHHHHHHHHHCEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCHHC EGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH SEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQ CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEECCCCCCHH DMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA HHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA