| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732668
Identifier: 187732668
GI number: 187732668
Start: 2898883
End: 2899128
Strand: Direct
Name: 187732668
Synonym: SbBS512_E3101
Alternate gene names: NA
Gene position: 2898883-2899128 (Clockwise)
Preceding gene: 187733920
Following gene: 187732211
Centisome position: 62.8
GC content: 50.81
Gene sequence:
>246_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA GTTGGCAGCATTACCCGTTCCGCGATGACGGGACGTTGCCTTTTCGGCTTCTCAGGCGAGAAGCCGTTCTTATTACCGGA CAATGA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases AGGGGTAAAGATGAACACTTCACCGGTGCGAATGGATGATTTACCGCTTAACCGTTTTCACTGCCGCATTGCTGCGCTCA CTTTCGGCGCACACCTGACC
Product: putative IS1 encoded protein
Products: NA
Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRDDGTLPFRLLRREAVLITG Q
Sequences:
>Translated_81_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRDDGTLPFRLLRREAVLITG Q >Mature_80_residues PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRDDGTLPFRLLRREAVLITGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8775; Mature: 8644
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPF CCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RDDGTLPFRLLRREAVLITGQ CCCCCCHHEEECCEEEEEECC >Mature Secondary Structure PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPF CCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RDDGTLPFRLLRREAVLITGQ CCCCCCHHEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA