| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is 187732663
Identifier: 187732663
GI number: 187732663
Start: 1339820
End: 1340149
Strand: Direct
Name: 187732663
Synonym: SbBS512_E1468
Alternate gene names: NA
Gene position: 1339820-1340149 (Clockwise)
Preceding gene: 187732238
Following gene: 187732097
Centisome position: 29.03
GC content: 57.58
Gene sequence:
>330_bases ATGAAAACCTTCCGCTGGAAAGTGAAACCCGGGATGGATGTGACATCGGCTCCTTCCGTCAGGGAGGTGCGCTTTGGTGA TGGCTATTCCCAGCGTGCGCCTGCCGGGCTGAACGCTGACCTGAAAACGTACAGCGTGACGCTGTCTGTCTCCCGTGAGG AGGCCACGGCGCTGGAGTCGTTTCTGGCTGAGCACGGGGGCTGGAAGGCCTTTCTGTGGACGCCGCCTTATGGTTACAGG CAGATAAAGGTGACCTGCGCAAAATGGTCGTCGCAGGTCAGTATGTTGCGTGTTGGGTTCAGCGCAGAGTTTAAACAGGT GGTGAACTGA
Upstream 100 bases:
>100_bases CGGCTGCTCTGAAGGCGGTGTATGACATGGCCCGCAAGGGTGCCCGTGATGAAATTCAGACACAGATGCGTGATGGTGGA CTGTTCTCCGGAGGTGGACG
Downstream 100 bases:
>100_bases TGCAGGATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGCTCTGGGAAATCGAT CTGACAGAGGTCGGTGGAGA
Product: phage minor tail protein
Products: NA
Alternate protein names: Phage Minor Tail Protein; Minor Tail Protein M; Bacteriophage Tail Protein; Gifsy-1 Prophage VmtM; Gifsy-2 Prophage Minor Tail Protein; Phage Minor Tail
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALESFLAEHGGWKAFLWTPPYGYR QIKVTCAKWSSQVSMLRVGFSAEFKQVVN
Sequences:
>Translated_109_residues MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALESFLAEHGGWKAFLWTPPYGYR QIKVTCAKWSSQVSMLRVGFSAEFKQVVN >Mature_109_residues MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALESFLAEHGGWKAFLWTPPYGYR QIKVTCAKWSSQVSMLRVGFSAEFKQVVN
Specific function: Unknown
COG id: COG4718
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12226; Mature: 12226
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALES CCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHH FLAEHGGWKAFLWTPPYGYRQIKVTCAKWSSQVSMLRVGFSAEFKQVVN HHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHCC >Mature Secondary Structure MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALES CCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHH FLAEHGGWKAFLWTPPYGYRQIKVTCAKWSSQVSMLRVGFSAEFKQVVN HHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA