| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is smg
Identifier: 187732610
GI number: 187732610
Start: 3411544
End: 3412017
Strand: Reverse
Name: smg
Synonym: SbBS512_E3669
Alternate gene names: 187732610
Gene position: 3412017-3411544 (Counterclockwise)
Preceding gene: 187731689
Following gene: 187733572
Centisome position: 73.92
GC content: 45.36
Gene sequence:
>474_bases ATGTTCGACGTACTAATGTATTTGTTTGAAACCTATATTCACACAGAAGCTGAGTTGCGTGTGGATCAAGACAAACTTGA ACAGGATCTTACCGACGCAGGATTTGATCGAGAAGATATCTACAATGCCCTGCTTTGGCTGGAAAAGCTTGCGGATTATC AGGAAGGACTGACAGAACCGATGCAACTGGCCTCTGATCCACTCTCCATGCGTATTTATACCCCTGAGGAGTGTGAAAGA CTGGATGCCAGCTGTCGTGGTTTTCTGCTTTTCCTTGAGCAAATTCAGGTGCTTAACCTTGAAATCCGTGAAATGGTGAT AGAGCGAGTGCTCGCGCTGGATACCGCAGAGTTCGACCTGGAAGACCTGAAATGGGTAATCCTGATGGTGTTGTTCAATA TTCCGGGCTGCGAAAATGCGTACCAGCAAATGGAAGAATTACTCTTTGAAGTGAATGAAGGTATGCTGCATTAA
Upstream 100 bases:
>100_bases CAACCTGTGCCAGAGGTAGTTACTCAACTACTCGAACTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGT CCGATTGAGGAGGGCATGCC
Downstream 100 bases:
>100_bases TCATTCCTTTAATTCAGCATAAGTTGTTATGGCGAAATCAGCACTGTTCACGGTGCGTAATAATGAGTCCTGCCCAAAGT GCGGGGCTGAACTGGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECER LDASCRGFLLFLEQIQVLNLEIREMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
Sequences:
>Translated_157_residues MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECER LDASCRGFLLFLEQIQVLNLEIREMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >Mature_157_residues MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECER LDASCRGFLLFLEQIQVLNLEIREMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
Specific function: Unknown
COG id: COG2922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smg family [H]
Homologues:
Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=96.1783439490446, Blast_Score=305, Evalue=7e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007456 [H]
Pfam domain/function: PF04361 DUF494 [H]
EC number: NA
Molecular weight: Translated: 18525; Mature: 18525
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLTEP CHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEIREMVIERVLALDTAEFDL HHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLTEP CHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEIREMVIERVLALDTAEFDL HHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA