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The map label for this gene is yccZ

Identifier: 187732435

GI number: 187732435

Start: 2120506

End: 2121666

Strand: Direct

Name: yccZ

Synonym: SbBS512_E2332

Alternate gene names: 187732435

Gene position: 2120506-2121666 (Clockwise)

Preceding gene: 187732989

Following gene: 187733751

Centisome position: 45.94

GC content: 50.39

Gene sequence:

>1161_bases
TTGACTGATAAATATAAACCAATGAAAAAGAACATTTTTAAGTTTTCGATACTGACATTGGCTGTTCTGTCTTTGACAGC
ATGTACCCTTGTTCCTGGTCAGAATTTATCGACCAGTAACAAGGATGTCATTGAACTACCTGACAATCAGTATGACCTGG
ACAAAATGGTCAATATCTATCCCGTCACGCCAGGATTGATTGATCAGTTGCGCGCCAAACCGATTATGTCGCAGGCTAAC
CCGGAGCTGGAGCAGCAAATCGCAAACTATGAATATCGTATCGGGATTGGTGATGTGTTGATGGTTACGGTCTGGGATCA
CCCGGAACTAACCACCCCCGCAGGGCAATACCGTAGCGCCAGTGATACCGGCAACTGGGTTAACGCCGATGGTGCGATTT
TCTACCCCTATATTGGTCGCCTGAAAGTGGCCGGGAAAACACTTACCCAGGTACGCAACGAGATTACAGCGCGTCTCGAT
TCAGTCATTGAAAGCCCGCAAGTCGATGTCAGCGTCGCGGCGTTCCGATCGCAAAAAGCGTACGTCACCGGCGAAGTCAG
CAAATCGGGTCAGCAGCCGATTACCAATATTCCTCTGACCATCATGGATGCGATTAACGCCGCGGGCGGTCTGACCGCAG
ATGCAGACTGGCGCAACGTGGTGCTCACCCAGAATGGCGTAAAGACCAAAGTGAACCTCTATGCGCTGATGCAGCGTGGC
GACTTGCGCCAGAACAAACTGCTGCACCCGGGCGATATTTTATTTATTCCGCGCAACGATGATCTGAAAGTCTTCGTGAT
GGGTGAAGTGGGTAAACAGAGCACGCTGAAAATGGACCGCAGCGGTATGACCCTGGCGGAAGCGCTGGGTAACGCTGAGG
GTATGAATCAGGATGTCGCTGATGCGACGGGGATTTTTGTTATTCGTGCAACGCAAAACAAGCAGAATGGCAAAATCGCC
AATATTTATCAGCTGAATGCGAAGGACGCATCGGCAATGATACTCGGAACGGAATTCCAGCTTGAACCTTACGACATTGT
TTATGTCACTACCGCGCCGCTGGCTCGTTGGAACCGTGTGATTTCTCTGCTGGTACCGACGATTTCCGGGGTGCATGACC
TGACAGAGACTTCACGGTGGATTCAAACATGGCCCAACTAA

Upstream 100 bases:

>100_bases
TGGTGGACAAATGCTGTCACGCAAATACCAGCTCTATCCAATGACGGCAGAGCGAGAAGTACCGGTTGGACAATAACCTG
ACGTAATTCATAACATTACA

Downstream 100 bases:

>100_bases
AATTTAACTCAATCCTGGTGGTTTGTACCGGCAACATTTGCCGTTCGCCCATTGGCGAGCGCTTGCTGCGTAAACGTCTG
CCAGGCGTAAAAGTCAAATC

Product: outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTDKYKPMKKNIFKFSILTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQAN
PELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLD
SVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRG
DLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIA
NIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN

Sequences:

>Translated_386_residues
MTDKYKPMKKNIFKFSILTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQAN
PELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLD
SVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRG
DLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIA
NIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN
>Mature_385_residues
TDKYKPMKKNIFKFSILTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANP
ELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDS
VIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGD
LRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIAN
IYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=379, Percent_Identity=99.7361477572559, Blast_Score=776, Evalue=0.0,
Organism=Escherichia coli, GI1788376, Length=379, Percent_Identity=64.1160949868074, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 42619; Mature: 42488

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKYKPMKKNIFKFSILTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCEEEE
PVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSA
ECCCHHHHHHHCCCHHHHCCHHHHHHHHCEEEEEECCCEEEEEEECCCCCCCCCCCCCCC
SDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKA
CCCCCEECCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCE
YVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRG
EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCC
DLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVA
CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCCCCCCCC
DATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRV
CCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHH
ISLLVPTISGVHDLTETSRWIQTWPN
HHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDKYKPMKKNIFKFSILTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIY
CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCEEEE
PVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSA
ECCCHHHHHHHCCCHHHHCCHHHHHHHHCEEEEEECCCEEEEEEECCCCCCCCCCCCCCC
SDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKA
CCCCCEECCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCE
YVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRG
EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCC
DLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVA
CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCCCCCCCC
DATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRV
CCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHH
ISLLVPTISGVHDLTETSRWIQTWPN
HHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]