Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is bcsE

Identifier: 187732428

GI number: 187732428

Start: 3729398

End: 3730534

Strand: Reverse

Name: bcsE

Synonym: SbBS512_E4000

Alternate gene names: 187732428

Gene position: 3730534-3729398 (Counterclockwise)

Preceding gene: 187733415

Following gene: 187734101

Centisome position: 80.82

GC content: 51.01

Gene sequence:

>1137_bases
TTGGTAATTAATCCCGGAAATAATAACGATAAACAATTTTCATTGTTGCTTGAGGAATACCGTTCACTTTTTGGTCTTGC
CAGTTTGCGTTTTCAGGGTGACCAACATTTGCTGGATATTGCCTTCTGGTGCAACGAAAAAGGGGTCAGCGCCCGTCAGC
AGCTTAGCGTTCAGCAACAAAATGGTATCTGGACATTAGTTCAAAGCGAAGAGGCGGAGATCCAACCACGCAGCGACGAA
AAACGCATTCTGAGTAATGTTGCTGTACTGGAAGGTGCGCCGCCGCTATCGGAACACTGGCAACTGTTCAACAATAACGA
AGTCCTGTTCAATGAAGCCCGTACCGCTCAGGCGGCGACGGTGGTCTTTTCTTTACAGCAAAATGCGCAAATCGAGCCAC
TGGCCCGCAGCATTCATACCCTGCGTCGCCAGCGCGGTAGTGCGATGAAAATCCTCGTGCGGGAAAATACCGCTAGCCTG
CGCGCCACCGATGAACGTTTGTTATTGGCCTGCGGTGCAAATATGGTTATTCCGTGGAATGCGCCACTCTCCCGTTGTCT
GACGATGATCGAAAGCGTGCAAGGGCAGAAGTTTAGTCGCTATGTGCCGGAAGATATCACTACCTTGCTGTCAATGACCC
AGCCGCTCAAACTGCGTGGTTTCCAGAAGTGGGATGTGTTCTGTAATGCCGTCAACAACATGATGAATAACCCTCTATTA
CCTGCCCACGGTAAAGGCGTTCTGGTTGCCCTACGTCCGGTACCGGGTATCCGCGTTGAACAAGCCCTGACGCTGTGTCG
CCCTAACCGTACCGGCGATATCATGACCATTGGCGGTAATCGGCTGGTGCTGTTTCTCTCATTCTGTCGGATTAACGATC
TGGATACCGCGTTGAATCATATTTTCCCATTGCCTACTGGCGACATTTTCTCAAACCGTATGGTCTGGTTTGAAGATGAT
CAAATCAGTGCCGAGCTGGTGCAGATGCGCCTGCTTGCCCCAGAACAATGGGGCATGCCGCTGCCTTTAACGCAAAGTTC
TAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACGAATACCAGAACCCATGCGACTGTTAGATGATGCTG
TGGAGCGCTCATCATGA

Upstream 100 bases:

>100_bases
GAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCTAAATGGAGCA
GGTTAAACCATTGTTCGCTT

Downstream 100 bases:

>100_bases
TGACCATCAGCGATATCATTGAAATTATTGTCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCT
TTGCGACGCATTCGCGACAC

Product: cellulose biosynthesis protein BcsE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDE
KRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASL
RATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL
PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDD
QISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS

Sequences:

>Translated_378_residues
MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDE
KRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASL
RATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL
PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDD
QISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
>Mature_378_residues
MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDE
KRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASL
RATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL
PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDD
QISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789958, Length=378, Percent_Identity=99.7354497354497, Blast_Score=774, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017745 [H]

Pfam domain/function: PF10995 DUF2819 [H]

EC number: NA

Molecular weight: Translated: 42781; Mature: 42781

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQ
CEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCCHHHHHHHHHC
NGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAAT
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEECCCEEEEECCCCHHHEE
VVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWN
EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCEEEEEECCCEEEECC
APLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL
CHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCC
PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNH
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHHCCCHHHHHHH
IFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHW
CCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEECCCCCCHH
RRIPEPMRLLDDAVERSS
HHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQ
CEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCCHHHHHHHHHC
NGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAAT
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEECCCEEEEECCCCHHHEE
VVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWN
EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCEEEEEECCCEEEECC
APLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL
CHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCC
PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNH
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHHCCCHHHHHHH
IFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHW
CCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEECCCCCCHH
RRIPEPMRLLDDAVERSS
HHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]