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The map label for this gene is ybiU [H]

Identifier: 187732419

GI number: 187732419

Start: 2327651

End: 2328916

Strand: Direct

Name: ybiU [H]

Synonym: SbBS512_E2527

Alternate gene names: 187732419

Gene position: 2327651-2328916 (Clockwise)

Preceding gene: 187733293

Following gene: 187733569

Centisome position: 50.43

GC content: 55.45

Gene sequence:

>1266_bases
ATGGCTTCTACTTTTACCAGCGACACATTGCCAGCCGATCACAAAGCAGCTATCCGTCAGATGAAGCACGCGCTGCGGGC
GCAGCTTGGCGACGTCCAGCAGATCTTTAATCAGCTAAGCGATGACATTGCCACGCGAGTGGCTGAAATCAACGCACTCA
AAGCACAGGGCGATGCCGTCTGGCCGGTGCTGTCTTATGCCGATATCAAAGCAGGTCATGTTACTGCAGAGCAGCGCGAA
CAGATTAAACGTCGCGGTTGTGCGGTGATAAAAGGCCATTTCCCCCGCGAACAAGCGCTAGGCTGGGATCAGTCGATGCT
GGACTATCTGGACCGCAACCGCTTTGACGAGGTCTACAAAGGCCCCGGCGATAATTTCTTCGGGACGCTCAGCGCTTCAC
GTCCCGAGATTTACCCCATCTACTGGTCGCAGACGCAAATGCAGGCCCGCCAGAGTGAAGAAATGGCGAATGCGCAGTCG
TTTCTCAATCGTCTGTGGACATTTGAAAGTGATGGAAAGCAATGGTTTAACCCGGATATGAGCGTCATCTACCCTGACCG
TATCCGCCGCCGTCCGCCCGGAACGACCTCCAAAGGTCTTGGAGCGCATACCGACTCCGGGGCGCTGGAACGCTGGCTGC
TTCCAGCGTATCAGCGCGTTTTCGCCAACGTCTTTAATGGCAATCTGGCGCAATATGATCCCTGGCATGCGGCACATCGT
ACGGAAGTTGAAGAGTACACGGTGGACAACACCACCAAATGTTCCGTGTTTCGGACATTCCAGGGCTGGACAGCGCTCTC
TGATATGCTGCCTGGTCAGGGGTTGCTGCACGTTGTGCCCATTCCTGAAGCCATGGCGTACGTACTGTTACGTACGCTGC
TTGATGATGTGCCGGAGGATGAACTGTGCGGCGTAGCGCCCGGAAGAGTGTTGCCGGTATCAGAGCAATGGCATCCACTG
TTAATTGAGGCGTTAACCAGCATTCCAAAACTCGAGGCCGGAGACTCCGTCTGGTGGCACTGCGACGTCATCCATTCCGT
TGCCCCCGTTGAAAATCAACAGGGTTGGGGCAACGTGATGTACATTCCTGCGGCACCGATGTGCAAGAAAAATCTTGCCT
ACGCGCACAAGGTGAAGGCCGCACTGGAAAAAGGCGCATCGCCGGGCGACTTCCCGCGCGAGGACTATGAAACAAACTGG
GAAGGACGCTTTACGCTTGCCGACCTCAACATTCACGGTAAGCGAGCGTTGGGCATGGATGTTTGA

Upstream 100 bases:

>100_bases
ACATCACATCAAATCATTAAACTTGCATTAACTTATTTATAACTTATATTGTCACATACAAATCATAATGGTTTCGAATG
AAAGTTAGTGAGAGGTGGTT

Downstream 100 bases:

>100_bases
GAGTTAATGGAAGTGAATTGATGTGGGATTAAGAAAATCGATTCGACGTTACTCAGATTGCTGACAAGTGCGCTTTCTTA
ATGCCTGATGCGGCGTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQRE
QIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQTQMQARQSEEMANAQS
FLNRLWTFESDGKQWFNPDMSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHR
TEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRTLLDDVPEDELCGVAPGRVLPVSEQWHPL
LIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCKKNLAYAHKVKAALEKGASPGDFPREDYETNW
EGRFTLADLNIHGKRALGMDV

Sequences:

>Translated_421_residues
MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQRE
QIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQTQMQARQSEEMANAQS
FLNRLWTFESDGKQWFNPDMSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHR
TEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRTLLDDVPEDELCGVAPGRVLPVSEQWHPL
LIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCKKNLAYAHKVKAALEKGASPGDFPREDYETNW
EGRFTLADLNIHGKRALGMDV
>Mature_420_residues
ASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQ
IKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQTQMQARQSEEMANAQSF
LNRLWTFESDGKQWFNPDMSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHRT
EVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRTLLDDVPEDELCGVAPGRVLPVSEQWHPLL
IEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCKKNLAYAHKVKAALEKGASPGDFPREDYETNWE
GRFTLADLNIHGKRALGMDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787042, Length=421, Percent_Identity=99.0498812351544, Blast_Score=872, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010856 [H]

Pfam domain/function: PF07350 DUF1479 [H]

EC number: NA

Molecular weight: Translated: 47395; Mature: 47264

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
WPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYK
CHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHC
GPGDNFFGTLSASRPEIYPIYWSQTQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDM
CCCCCCEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
SVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHR
EEECHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
TEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRTLLDDVPED
CCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCC
ELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVM
HHCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCEE
YIPAAPMCKKNLAYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGMD
EECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
V
C
>Mature Secondary Structure 
ASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
WPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYK
CHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHC
GPGDNFFGTLSASRPEIYPIYWSQTQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDM
CCCCCCEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
SVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHR
EEECHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
TEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRTLLDDVPED
CCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCC
ELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVM
HHCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCEE
YIPAAPMCKKNLAYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGMD
EECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]