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The map label for this gene is cheM

Identifier: 187732383

GI number: 187732383

Start: 1982640

End: 1984058

Strand: Reverse

Name: cheM

Synonym: SbBS512_E2179

Alternate gene names: 187732383

Gene position: 1984058-1982640 (Counterclockwise)

Preceding gene: 187733786

Following gene: 187731667

Centisome position: 42.98

GC content: 52.85

Gene sequence:

>1419_bases
ATGATTAACCGTATCCGCGTAGTCACGCTGTTGGTAATGGTGTTGGGGGTATTTGCACTGTTACAGCTTATTTCCGGCAG
TCTGTTTTTTTCTTCCCTTCACCATAGCCAGAAGAGCTTTGTGGTTTCCAATCAATTGCGGGAACAGCAGGGCGAGCTGA
CGTCAACCTGGGATTTAATGCTGCAAACGCGCATTAACCTGAGTCGTTCAGCGGTGCGGATGATGATGGATTCCTCCAAT
CAACAAAGTAACGCCAAAGTTGAATTGCTCGATAGCGCCAGGAAAACATTGGCGCAGGCAGCGACGCATTATAAAAAATT
CAAAAGCATGGCACCGTTACCTGAAATGGTCGCTACCAGTCGTAATATTGATGAAAAATATAAAAACTATTACACAGCGT
TAACTGAACTGATTGATTATCTAGATTATGGCAATACTGGAGCTTATTTCGCTCAGCCAACCCAGGGAATGCAAAACATT
GACGGGCGCAGTGAAATGGGCGACCTGGCGCAGAGCGTTTCACATATGCAACGCTCTTTGACTGACACCGTCACTCATGT
CCGCGAAGGTTCAGATGCCATCTATGCCGGTACCCGTGAAATTGCGGCGGGCAACACCGATCTTTCCTCCCGTACTGAAC
AGCAGGCATCCGCGCTGGAAGAAACTGCCGCCAGCATGGAGCAGCTCACCGCGACAGTGAAGCAAAACGCCGATAACGCC
CGCCAGGCCTCGCAACTGGCGCAAAGTGCCTCCGACACCGCCCAGCACGGCGGCAAAGTGGTGGATGGCGTAGTGAAAAC
GATGCATGAGATCGCCGATAGTTCGAAGAAAATTGCCGACATTATCAGCGTTATCGACGGTATCGCCTTCCAGACTAATA
TCCTCGCGCTGAATGCCGCGGTTGAAGCCGCGCGTGCGGGTGAACAGGGCCGTGGTTTTGCCGTGGTGGCGGGTGAAGTG
CGTAATCTTGCCAGTCGCAGCGTCCAGGCGGCAAAAGAGATCAAAGCCCTCATTGAAGACTCCGTCGCACGCGTTGATAC
CGGTTCGGTGCTGGTCGAAAGCGCCGGGGAAACAATGAACAATATCGTCAATGCTGTCACTCGCGTGACTGACATTATGG
GCGAGATTGCATCGGCATCGGATGAACAGAGCCGTGGCATCGTTCAAGTCGCATTGGCGGTTTCGGAAATGGATCGCGTC
ACGCAACAGAACGCATCGCTGGTGCAGGAATCAGCTGCCGCCGCCGCTGCGCTGGAAGAACAGGCGAGTCGTTTAACGCA
AGCGGTTTCCACGTTCCGTCTGGCAGCCAGCCCACTCACCAATAAACCGCAAACACCATCCCGTCCTGCCAGTGAGCAAC
CACCGGCACAGCCACGACTGCGAATTGCTGAACAAGATCCAAACTGGGAAACATTTTGA

Upstream 100 bases:

>100_bases
TCGGGTTTTTTATTTCAATTTCGCGGCGGGTGGCATCAGCAATAAAGTTTCCCCCCTTCTTGCCGATAACGAGATCAACT
TGTTTTCAGGAAGGTGCCTT

Downstream 100 bases:

>100_bases
CGAGTATTTACTAACGCGGTCATTGCCGCCTGATGGGGAGCGTTGATGTTTAATCGTATTCGAATTTCGACCACGCTGTT
TTTAATTTTGATTCTCTGCG

Product: methyl-accepting chemotaxis protein II

Products: NA

Alternate protein names: MCP-II; Aspartate chemoreceptor protein [H]

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSN
QQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNI
DGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNA
RQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RNLASRSVQAAKEIKALIEDSVARVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIVQVALAVSEMDRV
TQQNASLVQESAAAAAALEEQASRLTQAVSTFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF

Sequences:

>Translated_472_residues
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSN
QQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNI
DGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNA
RQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RNLASRSVQAAKEIKALIEDSVARVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIVQVALAVSEMDRV
TQQNASLVQESAAAAAALEEQASRLTQAVSTFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF
>Mature_472_residues
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSN
QQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNI
DGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNA
RQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RNLASRSVQAAKEIKALIEDSVARVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIVQVALAVSEMDRV
TQQNASLVQESAAAAAALEEQASRLTQAVSTFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=554, Percent_Identity=72.5631768953069, Blast_Score=709, Evalue=0.0,
Organism=Escherichia coli, GI2367378, Length=339, Percent_Identity=69.0265486725664, Blast_Score=401, Evalue=1e-113,
Organism=Escherichia coli, GI1787690, Length=290, Percent_Identity=65.8620689655172, Blast_Score=355, Evalue=4e-99,
Organism=Escherichia coli, GI1788194, Length=275, Percent_Identity=68, Blast_Score=340, Evalue=8e-95,
Organism=Escherichia coli, GI1789453, Length=268, Percent_Identity=45.5223880597015, Blast_Score=214, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 50954; Mature: 50954

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
RNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNIDGRSEMGDLAQSVSHMQRSL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
TDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNA
HHHHHHHHCCCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAARAGEQGRGFAVVAGEVRNLASRSVQAAKEIKALIEDSVARVDTGSVLVESAGETMN
HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NIVNAVTRVTDIMGEIASASDEQSRGIVQVALAVSEMDRVTQQNASLVQESAAAAAALEE
HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QASRLTQAVSTFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
RNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNIDGRSEMGDLAQSVSHMQRSL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
TDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNA
HHHHHHHHCCCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAARAGEQGRGFAVVAGEVRNLASRSVQAAKEIKALIEDSVARVDTGSVLVESAGETMN
HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NIVNAVTRVTDIMGEIASASDEQSRGIVQVALAVSEMDRVTQQNASLVQESAAAAAALEE
HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QASRLTQAVSTFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6305515; 9097040; 9278503; 9315712 [H]