| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is entC
Identifier: 187732369
GI number: 187732369
Start: 478538
End: 479713
Strand: Direct
Name: entC
Synonym: SbBS512_E0495
Alternate gene names: 187732369
Gene position: 478538-479713 (Clockwise)
Preceding gene: 187732284
Following gene: 187731959
Centisome position: 10.37
GC content: 56.21
Gene sequence:
>1176_bases ATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTA CCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCTTTGATGAACCGGCTGTGAACGGGGATTCGCCCGACAGTCCCTTCC AGCAAAAACTCGCCGCGCTGTTTGCCGATGCCAAAGTGCAGGGCATCAAAAATCCGGTGATGGTCGGGGCGATTCCCTTC GATCCACGTCAGCCTTCGTCGCTGTATATTCCTGAATCCTGGCAGTCGTTCTCCCGTCAGGAAAAACAAGCTTCCGCCCG CCGTTTCACCCGCAGCCAGTCGCTGAATGTGGTGGAACGCCAGGCAATTCCGGAACAAACCACGTTTGAACAGATGGTTG CCCGCGCTGCCGCACTTACCGCCACGCCGCAGGTCGACAAAGTGGTGTTGTCACGGTTGATTGATATCACCACTGACGCC GCCATTGATAGTGGCGTATTGCTGGAACGGTTGATTGCGCAAAACCCGGTTAGTTACAACTTCCATGTCCCGCTGGCTGA TGGTGGCGTCCTGCTGGGGGCCAGCCCGGAACTGCTGCTACGTAAAGACGGCGAGCGTTTTAGCTCCATTCCGTTAGCCG GTTCCGCGCGTCGTCAGCCGGATGAAGTGCTCGATCGCGAAGCGGGTAATCGTCTGCTGGCGTCAGAAAAAGATCGCCAT GAACATGAACTGGTGACTCAGGCGATGAAAGAGGTACTGCGCGAACGCAGTAGTGAGTTACACGTTCCCTCCTCTCCACA ATTGATTACCACGCCGACGCTGTGGCATCTCGCAACTCCCTTTGAAGGTAAAGCGAATTCGCAAGAAAACGCACTGACTC TGGCCTGTCTGCTGCATCCGACCCCCGCGCTGAGCGGTTTCCCGCATCAGGCCGCGACTCAGGTTATTGCTGAACTGGAG CCGTTCGACCGCGAACTGTTTGGCGGCATTGTGGGTTGGTGTGACAGCGAAGGTAACGGCGAATGGGTGGTGACCATCCG CTGCGCGAAGCTGCGGGAAAATCAGGTGCGTCTGTTTGCCGGAGCGGGGATTGTGCCTGCGTCGTCACCGTTGGGTGAGT GGCGCGAAACAGGCGTCAAACTTTCTACCATGTTGAATGTTTTTGGATTGCATTAA
Upstream 100 bases:
>100_bases ACCTCAAGAGTTGACATAGTGCGCGTTTGCTTTTAGGTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTT ATCATTTTGTGGAGGATGAT
Downstream 100 bases:
>100_bases GGAGCGAGGATGAGCATTCCATTCACCCGCTGGCCGGAAGAGTTTGCCCGTCGCTATCGGGAAAAAGGCTACTGGCAGGA TTTGCCGCTGACCGACATTC
Product: isochorismate synthase, entC
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPF DPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELE PFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH
Sequences:
>Translated_391_residues MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPF DPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELE PFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH >Mature_391_residues MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPF DPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELE PFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=391, Percent_Identity=99.7442455242967, Blast_Score=800, Evalue=0.0, Organism=Escherichia coli, GI87082077, Length=276, Percent_Identity=31.5217391304348, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788114, Length=200, Percent_Identity=28, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1787518, Length=227, Percent_Identity=29.0748898678414, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=212, Percent_Identity=28.3018867924528, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 42960; Mature: 42960
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAAL CCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHH FADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVER HHHHHHHCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYN HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEE FHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EEEEECCCCEEECCCCCEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHP HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHEECCCCCCCCCCCCCEEEEEEEECC TPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFA CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCEEEEE GAGIVPASSPLGEWRETGVKLSTMLNVFGLH CCCCCCCCCCHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAAL CCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHH FADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVER HHHHHHHCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYN HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEE FHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EEEEECCCCEEECCCCCEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHP HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHEECCCCCCCCCCCCCEEEEEEEECC TPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFA CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCEEEEE GAGIVPASSPLGEWRETGVKLSTMLNVFGLH CCCCCCCCCCHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]