| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is hisQ
Identifier: 187732192
GI number: 187732192
Start: 2486559
End: 2487245
Strand: Reverse
Name: hisQ
Synonym: SbBS512_E2686
Alternate gene names: 187732192
Gene position: 2487245-2486559 (Counterclockwise)
Preceding gene: 187731129
Following gene: 187732602
Centisome position: 53.88
GC content: 52.55
Gene sequence:
>687_bases ATGTTGTATGGGTTTTCAGGTGTTATTTTACAGGGTGCGCTCGTCACGCTGGAGCTGGCTATCAGCTCTGTAGTGCTCGC TGTAATCATCGGTTTAATTGGCGCTGGCGGTAAGCTCTCGCAAAATCGGCTTTCGGAGCTGATTTTCGAAGGGTACACCA CGCTGATTCGTGGCGTGCCGGACTTAGTGTTGATGCTGCTGATTTTCTTCGGTTTGCAGATTGCGCTAAACACGGTGACG GAGGCGATGGGCGTCGGGCAGATTGATATCGATCCGATGGTCGCTGGTATTATCACTCTCGGTTTTATCTACGGTGCTTA TTTTACCGAAACGTTCCGTGGTGCTTTTATGGCAGTGCCGAAAGGACATATAGAGGCGGCGACGGCGTTCGGTTTTACTC GTGGGCAAGTGTTTCGGCGGATCATGTTTCCGGCGATGATGCGTTACGCCCTGCCAGGCATTGGCAACAACTGGCAGGTG ATCCTCAAATCTACCGCACTGGTTTCGTTACTCGGCCTGGAAGATGTGGTCAAAGCCACCCAACTGGCAGGCAAAAGTAC CTGGGAACCGTTCTATTTCGCCATCGTCTGTGGCGTGATTTACCTGGTTTTCACCACTGTTTCCAATGGTGTGCTGCTGT TCCTTGAGCGCCGCTACTCCGTGGGTGTGAAGAGGGCTGACCTGTGA
Upstream 100 bases:
>100_bases ATGGTGGCTAATCGCCATCGGTGAAAGAAAGCCCGCTCCCTTCGGGTAACCGGAGGGAGACAAGAGGCGGTAATTCACCA CACACGACAGGACAGGCAGC
Downstream 100 bases:
>100_bases TCGAAATCTTACATGAATACTGGAAACCGCTGCTGTGGACCGACGGTTATCGCTTTACTGGTGTGGCGATCACTCTGTGG CTGCTTATTTTGTCGGTAGT
Product: histidine ABC transporter permease HisQ
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVT EAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL
Sequences:
>Translated_228_residues MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVT EAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL >Mature_228_residues MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVT EAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=228, Percent_Identity=98.6842105263158, Blast_Score=446, Evalue=1e-127, Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=32.3008849557522, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1788645, Length=222, Percent_Identity=30.6306306306306, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=27.5700934579439, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788226, Length=199, Percent_Identity=29.6482412060301, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=23.3333333333333, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786874, Length=220, Percent_Identity=26.8181818181818, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87082239, Length=219, Percent_Identity=27.3972602739726, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24690; Mature: 24690
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH DLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECC KGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKAT CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCC >Mature Secondary Structure MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH DLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECC KGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKAT CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]