| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is proQ
Identifier: 187731993
GI number: 187731993
Start: 1907656
End: 1908354
Strand: Reverse
Name: proQ
Synonym: SbBS512_E2099
Alternate gene names: 187731993
Gene position: 1908354-1907656 (Counterclockwise)
Preceding gene: 187733740
Following gene: 187731498
Centisome position: 41.34
GC content: 52.93
Gene sequence:
>699_bases ATGGAAAATCAACCTAAGTTGAATAGCAGTAAAGAAGTAATCGCGTTTCTGGCCGAACGTTTTCCCCACTGTTTCAGTGC GGAAGGTGAAGCGCGTCCGCTGAAAATCGGTATTTTTCAGGATTTGGTCGATCGTGTTGCCGGGGAAATGAACCTGAGCA AAACGCAATTACGATCCGCTTTACGTCTCTACACTTCGAGCTGGCGTTATCTTTACGGTGTTAAACCCGGCACAACGCGT GTCGATCTTGACGGCAACCCATGCGGTGAGCTGGACGAGCAACATGTAGAGCATGCTCGCAAGCAGCTTGAAGAAGCGAA AGCGCGTGTTCAGGCACAGCGTGCTGAACAGCAAGCGAAAAAACGCGAAGCTGCCGCAGCTGCTGGTGAGAAAGAAGACG CACCGCGCCGCGAACGCAAGCCACGTCCGACCACGCCACGCCGCAAAGAAGGCGCTGAACGTAAACCTCGTGCGCAAAAG CCGGTAGAGAAAGCGCCAAAAACAGTAAAAGCACCTCGCGAAGAACAGCACACCCCGGTTTCTGACATTTCAGCTCTGAC TGTCGGACAAGCTCTGAAGGTGAAAGCGGGTCAAAACGCGATGGATGCCACCGTATTAGAAATCACCAAAGACGGCGTCC GCGTCCAGCTGAATTCGGGTATGTCTTTGATTGTGCGCGCAGAACACCTGGTGTTCTGA
Upstream 100 bases:
>100_bases ATAATCAACGGATAACGTAGCATTTACTGGTAGCGTCATTATAATGACGCCTGTTCATGCCTGCGCTTGTTGGCTACGTC CGTTGTAATCAGGAAATTTC
Downstream 100 bases:
>100_bases AACGGAGGCCGGGCCAGGCATGAACATGTTTTTTAGGCTTACCGCGTTAGCTGGCCTGCTTGCAATAGCAGGCCAGACCT TCGCTGTAGAAGATATCACG
Product: putative solute/DNA competence effector
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGTTR VDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF
Sequences:
>Translated_232_residues MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGTTR VDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF >Mature_232_residues MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGTTR VDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF
Specific function: Not exactly known; may be a structural element that influences the osmotic activation of proP at a post-translational level [H]
COG id: COG3109
COG function: function code T; Activator of osmoprotectant transporter ProP
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the proQ family [H]
Homologues:
Organism=Escherichia coli, GI48994892, Length=232, Percent_Identity=99.1379310344828, Blast_Score=471, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016103 [H]
Pfam domain/function: PF04352 ProQ [H]
EC number: NA
Molecular weight: Translated: 25893; Mature: 25893
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSA CCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHH LRLYTSSWRYLYGVKPGTTRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAK HHHHHCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPV HHHHHHHCCCCCCCCHHHCCCCCCCCCHHCCCCCCCCCCCCHHHCCHHHCCCCHHCCCCH SDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF HHHHHHHHCHHHEECCCCCHHHHHHHEEECCCEEEEECCCCEEEEEHHHHCC >Mature Secondary Structure MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSA CCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHH LRLYTSSWRYLYGVKPGTTRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAK HHHHHCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPV HHHHHHHCCCCCCCCHHHCCCCCCCCCHHCCCCCCCCCCCCHHHCCHHHCCCCHHCCCCH SDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF HHHHHHHHCHHHEECCCCCHHHHHHHEEECCCEEEEECCCCEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA