Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is ydhV [H]

Identifier: 187731901

GI number: 187731901

Start: 1715346

End: 1716992

Strand: Reverse

Name: ydhV [H]

Synonym: SbBS512_E1873

Alternate gene names: 187731901

Gene position: 1716992-1715346 (Counterclockwise)

Preceding gene: 187733648

Following gene: 187730741

Centisome position: 37.2

GC content: 49.12

Gene sequence:

>1647_bases
TTGACCAGTCCGGAAACCTGTGTGGCGGCTATTGGTCAGGCTGGGGAAAACCTTGTTCCTCTCTCTGGCATGTTGAATAG
CCGTAACCACAGCGGCGGTGCGGGAACTGGCGCAATTATGGGTTCGAAAAACCTGAAAGCGATTGCGGTTGAAGGGACGA
AAGGGGTCAACATTGCCGATCGTCAGGAGATGAAGCGTCTCAACGATTACATGATGACTGAACTTATTGGTGCGAATAAC
AACCATGTCGTGCCAAGTACGCCGCAATCGTGGGCAGAGTATTCAGATCCCAAGTCACGTTGGACAGCACGTAAAGGGCT
GTTTTGGGGCGCGGCTGAAGGTGGTCCGATTGAAACGGGGGAAATTCCGCCAGGCAATCAGAACACGGTCGGCTTTCGTA
CCTATAAATCCGTTTTTGACTTAGGTCCGGCGGCAGAGAAATACACAGTAAAAATGAGTGGCTGCCACTCTTGCCCGATC
CGTTGTATGACCCAAATGAATATTCCTCGGGTGAAAGAGTTTGGCGTGCCCAGCACAGGTGGTAACACTTGTGTAGCCAA
CTTTGTCCATACCACCATCTTTCCGAACGGTCCGAAAGATTTTGAAGATAAAGACGATGGCCGTGTGATTGGTAACTTGG
TTGGTCTGAATTTGTTCGATGACTACGGCCTATGGTGTAACTACGGGCAGTTGCATCGCGACTTTACTTATTGTTACAGC
AAAGGGGTGTTCAAGCGTGTTCTGCCTGCTGAAGAGTATGCGGAAATTCACTGGGATCAACTGGAAGCGGGTGACGTTAA
TTTCATTAAAGATTTTTACTACCGTCTGGCGCATCGTGTGGGTGAGCTGAGTCACCTGGCTGATGGTTCATATGCCATCG
CAGAACGCTGGAATTTGGGTGAAGAGTACTGGGGCTACGCGAAAAATAAACTCTGGTCGCCGTTTGGCTATCCGGTTCAC
CATGCCAATGAAGCGTCAGCGCAGGTCGGTTCCATTGTTAACTGTATGTTCAACCGTGACTGCATGACACATACCCATAT
CAACTTTATTGGTTCCGGCTTGCCATTGAAACTGCAACGTGAAGTGGCGAAAGAGCTTTTTGGTTCTGAAGATGCCTACG
ATGAAACCAAAAACTACACGCCAATCAATGACGCAAAAATTAAATATGCTAAGTGGTCGCTGTTGCGGGTCTGTTTGCAT
AACGCCGTCACCCTGTGTAACTGGGTCTGGCCAATGACCGTTTCGCCGCTGAAAAGCCGTAATTACCGGGGCGATCTGGC
GCTTGAAGCCAAATTCTTCAAAGCGATCACCGGCGAAGAGATGACTCAGGAAAAATTAGATTTAGCTGCAGAGCGTATCT
TTACGTTGCATCGTGCCTACACGGTAAAACTTATGCAAACCAAAGATATGCGTAATGAACACGATCTTATCTGTTCCTGG
GTATTCGACAAGGATCCGCAGATCCCGGTCTTTACTGAAGGTACTGACAAAATGGATCGTGACGATATGCATGCTTCGCT
CACGATGTTCTACAAAGAAATGGGCTGGGACCCACAGCTTGGTAGTCCCACCCGCGAAACATTGCAGCGTCTGGGGCTGG
AAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGTGTAA

Upstream 100 bases:

>100_bases
ACCGGTATGGCTGAAGATTAAAGATGACAAAGTTAGCCTGGAAAAAGCCGATTTCTTATGGGGAAAAGGGACGCGCGCAA
CGACGGAAGAAATTTGTCGA

Downstream 100 bases:

>100_bases
GGAATGGGTGAGATGAACCATCGGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATGGTT
ACAGGGGATGCGTCACCCCG

Product: aldehyde ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANN
NHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPI
RCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
KGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVH
HANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLH
NAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSW
VFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQRLGLEDIAADLAAHNLLPV

Sequences:

>Translated_548_residues
MTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANN
NHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPI
RCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
KGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVH
HANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLH
NAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSW
VFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQRLGLEDIAADLAAHNLLPV
>Mature_547_residues
TSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNN
HVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIR
CMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSK
GVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHH
ANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHN
AVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWV
FDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQRLGLEDIAADLAAHNLLPV

Specific function: Unknown

COG id: COG2414

COG function: function code C; Aldehyde:ferredoxin oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AOR/FOR family [H]

Homologues:

Organism=Escherichia coli, GI1787962, Length=548, Percent_Identity=99.2700729927007, Blast_Score=1150, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013985
- InterPro:   IPR013983
- InterPro:   IPR001203 [H]

Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]

EC number: NA

Molecular weight: Translated: 61480; Mature: 61349

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIAD
CCCHHHHHHHHHHCCCCEECHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCC
RQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETG
HHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCC
EIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTG
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCCCCHHHCCCCCCC
GNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
CCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCEECCCCCEECCHHHHHHHHHHHH
KGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLG
HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCC
EEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHH
EVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSR
HHHHHHCCCCCCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
NYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSW
CCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCEEEEE
VFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQRLGLEDIAADL
EECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH
AAHNLLPV
HHHCCCCC
>Mature Secondary Structure 
TSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIAD
CCHHHHHHHHHHCCCCEECHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCC
RQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETG
HHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCC
EIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTG
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCCCCHHHCCCCCCC
GNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
CCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCEECCCCCEECCHHHHHHHHHHHH
KGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLG
HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCC
EEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHH
EVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSR
HHHHHHCCCCCCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
NYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSW
CCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCEEEEE
VFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQRLGLEDIAADL
EECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH
AAHNLLPV
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503 [H]