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The map label for this gene is rhaB

Identifier: 187731756

GI number: 187731756

Start: 4090934

End: 4092349

Strand: Reverse

Name: rhaB

Synonym: SbBS512_E4382

Alternate gene names: 187731756

Gene position: 4092349-4090934 (Counterclockwise)

Preceding gene: 187733178

Following gene: 187732331

Centisome position: 88.66

GC content: 55.3

Gene sequence:

>1416_bases
ATGACCTTTCGCAATTGTGTCGCCGTCGATCTCGGCGCATCCAGTGGGCGCGTGATGCTGGCGCGTTACGAGCGTGAATG
CCGCAGCCTGACGCTGCGCGAAATCCATCATTTTAACAATGGCCTGCATAGCCAGAACGGTTATGTCACCTGGAATGTGG
ATAGCCTGGAAAGTGCCATTCGCCTTGGATTAAACAAGGTGTGCGAGGAAGGGATTCGTATCGATAGCATTGGGATTGAT
ACCTGGGGCGTGGACTTTGTGCTGCTCGACCAACAGGGTCAGCGTGTGGGCCTGCCCGTTGCTTATCGCGATAGCCGCTC
CAATGGCCTAATGGCGCAGGCACAGCAACAACTCGGCAAACGCGATATTTATCAACGTAGCGGCATCCAGTTTCTGCCCT
TCAATACGCTTTATCAACTGCGTGCGCTGACGGAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATG
CCGGATTACTTCAGCTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAATGCCACCACCACACAACTGGTCAATAT
CAATAGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTGGTCGCCCGACGCATCCGG
GTAATGTCATTGGGCACTGGATTTGCCCGCAGGGTAATGAGATTCCGGTGGTCGCCGTTGCCAGCCATGATACCGCCAGC
GCGGTTATCGCCTCGCCGTTAAACGGTTCACGCGCTGCTTATCTCTCTTCTGGCACCTGGTCATTGATGGGCTTCGAAAG
CCAGACGCCATTTACCAATGACACGGCGCTGGCAGCCAACATAACCAATGAAGGCGGGGCGGAAGGTCGCTATCGGGTGC
TGAAAAATATTATGGGCTTATGGCTGCTTCAGCGAGTGCTTCAGGAGCGGCAAATCAACGATCTCCCGGCGCACTTTCTC
TCCCACTGCGAGCGCATTAAAGCCACCAACGGTAAAGATCGGGTGATCATGCACTGCCACGCCACCAACCTGATCGCCCT
CACCTATGTACTGGAAAACGACACCGCGGTCTTTACTCGCCAACTGTGGGAAGGCAGCACCGAGTGTCTGGTGGTATTCC
CGGATGGCGTTGGCATTCTGCCGTGGATGGTGCCCGGCACGGACGAAATCGGCCAGGCGACCGCACAAGAGATGCAAAAA
CATTCGCTGGTGTTGTGGCCCTTCCACGGCGTCTTCGGCAGCGGGTCGACGTTGGATGAAACATTCGGTTTAATCGACAC
CGCAGAAAAATCAGCACAAGTATTAGTGAAGGTTTATTCGATGGGCGGCATGAAACAGACCATCAGCCGTGAAGAGTTGA
TAGCGCTCGGCAAGCGCTTCGGCGTTACACCACTAGCCAGTGCGCTGGCGCTGTAA

Upstream 100 bases:

>100_bases
TCCCTGGTTGCCAATGGCCCATTTTCCTGTCAGTAACGAGAAGGTCACGAATTCAGGCGCTTTTTAGACTGGTCGTAATG
AAATTCAGCAGGATCACATT

Downstream 100 bases:

>100_bases
GGAGCAAACATGATCCGCAAAGCCTTTGTCATGCAGGTTAACCCCGACGCCCACGAAGAGTATCAGCGTCGGCATAACCC
CATCTGGCCGGAACTGGAAG

Product: rhamnulokinase

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHHFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGID
TWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPAHFL
SHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQK
HSLVLWPFHGVFGSGSTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL

Sequences:

>Translated_471_residues
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHHFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGID
TWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPAHFL
SHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQK
HSLVLWPFHGVFGSGSTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL
>Mature_470_residues
TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHHFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDT
WGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMP
DYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASA
VIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPAHFLS
HCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKH
SLVLWPFHGVFGSGSTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=341, Percent_Identity=93.841642228739, Blast_Score=658, Evalue=0.0,
Organism=Escherichia coli, GI1790336, Length=159, Percent_Identity=98.1132075471698, Blast_Score=324, Evalue=7e-90,
Organism=Escherichia coli, GI1789168, Length=345, Percent_Identity=25.5072463768116, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 52222; Mature: 52091

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHHFNNGLHSQNGYVTWNVDSLESAI
CCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH
RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGK
HHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCEECCEEEECCCCCCCHHHHHHHHHHH
RDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNAT
HHHHHHCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC
TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
EEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL
CEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
WLLQRVLQERQINDLPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTR
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEECCCHHHHH
QLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGSTLDE
HHHCCCCCEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHH
TFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHHFNNGLHSQNGYVTWNVDSLESAI
CCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH
RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGK
HHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCEECCEEEECCCCCCCHHHHHHHHHHH
RDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNAT
HHHHHHCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC
TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
EEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL
CEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
WLLQRVLQERQINDLPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTR
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEECCCHHHHH
QLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGSTLDE
HHHCCCCCEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHH
TFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA