| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731697
Identifier: 187731697
GI number: 187731697
Start: 2397313
End: 2397855
Strand: Reverse
Name: 187731697
Synonym: SbBS512_E2595
Alternate gene names: NA
Gene position: 2397855-2397313 (Counterclockwise)
Preceding gene: 187732541
Following gene: 187731391
Centisome position: 51.95
GC content: 47.88
Gene sequence:
>543_bases TTGCATTTAAAAAATATTACTGCGGGTAATCCGAAAACTGCGGAACAATACCAGATGACAAAAAAATATGATATTACTTG GCTTTTTTCGGAGGACGACAAAAACTGGTATGAAGAACTGAAGAATTTCGCCAGCGACACAATTAAAATAGCTTACACCG GAGACGGGCGCGTGGTGTGGGTCGGTAAGGATGTGACAGGCATTGAACCCCGTAACGCCAGTGTTATTGAAGTTCCTGAT ATTACCGCCAACCGCCGCATTACCGCGCCGGGTTACTGGTTTTACCGCAATGATGAATTTGTCTTTGACTACAGACTCAA AGCGGAAGATGAGCGTGATGCCCTTCTGGCTCAGGTCAGAGCCCGGACAGGGGAATGGGAAGAAGACCTGCTGCTGGGGT TAATCAGCGACGAAGATAAAGAAAAGCTGAAAGCCTGTCGTATTTACGCGAAATCGCTGCAGGCGATGGATTTCAGCACC ATCACAGATAAAGCCACATATAACGCCATCAACTGGCCGGAGCGTCCCGATGCCGCAGCTTAA
Upstream 100 bases:
>100_bases TCAATCATCTGTACTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATACTGGTTGTCTGGA GATTCTGGGGGCCAGTCTAG
Downstream 100 bases:
>100_bases AGGTGTGATTAAAACGCCCACGGGAGAACCGCTGGACGGCGCAACCATTACACTAACCTCCATACACAACCGTGCAGGGA TTCTGAAAAGTGTTTTCAGC
Product: tail fiber assembly protein
Products: NA
Alternate protein names: Bacteriophage Tail Protein; Phage Tail Fiber Assembly Protein; Phage Gene; Tail Fiber Assembly Protein GpG; Phage Tail Fibre Assembly Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MHLKNITAGNPKTAEQYQMTKKYDITWLFSEDDKNWYEELKNFASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPD ITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVRARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFST ITDKATYNAINWPERPDAAA
Sequences:
>Translated_180_residues MHLKNITAGNPKTAEQYQMTKKYDITWLFSEDDKNWYEELKNFASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPD ITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVRARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFST ITDKATYNAINWPERPDAAA >Mature_180_residues MHLKNITAGNPKTAEQYQMTKKYDITWLFSEDDKNWYEELKNFASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPD ITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVRARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFST ITDKATYNAINWPERPDAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20801; Mature: 20801
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLKNITAGNPKTAEQYQMTKKYDITWLFSEDDKNWYEELKNFASDTIKIAYTGDGRVVW CCCCCCCCCCCCCHHHHHHCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCEEEE VGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVR EECCCCCCCCCCCCEEECCCCCCCCEEECCCEEEEECCCEEEEEEECCCCCHHHHHHHHH ARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA HCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure MHLKNITAGNPKTAEQYQMTKKYDITWLFSEDDKNWYEELKNFASDTIKIAYTGDGRVVW CCCCCCCCCCCCCHHHHHHCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCEEEE VGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVR EECCCCCCCCCCCCEEECCCCCCCCEEECCCEEEEECCCEEEEEEECCCCCHHHHHHHHH ARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA HCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA