| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yjfN [H]
Identifier: 187731606
GI number: 187731606
Start: 4410515
End: 4410802
Strand: Reverse
Name: yjfN [H]
Synonym: SbBS512_E4718
Alternate gene names: 187731606
Gene position: 4410802-4410515 (Counterclockwise)
Preceding gene: 187731161
Following gene: 187732642
Centisome position: 95.55
GC content: 50.69
Gene sequence:
>288_bases ATGGAGCTGACGATGAAACAATTACTTGCTTCACCCTCGCTGCAATTAGTGACTTATCCTGCGAGCGCCACGGCACAGTC TGCAGAATTCGCCAGTGCTGACTGCGTGACGGGCCTGAATGAAATAGGTCAGATCTCAGTTAGCAATATTTCAGGGGATC CGCAGGACGTGGAACGTATCGTGGCGTTAAAGGCCAATGAACAAGGTGCGTCATGGTACCGCATTATTACCATGTACGAA GACCAGCAGCCTGATAACTGGCGCGTACAGGCGATACTGTATGCATGA
Upstream 100 bases:
>100_bases GCGTCCCTATGCGTTTACCTGTGCACAATAAATTACCGGCTGGAAGCCTGGGCGTTTATTACCGCGATGGAATGCCCTGC AACATGTGGGGAAACGAAAA
Downstream 100 bases:
>100_bases GTGTCATCTACAGCAAATGAACAATGCCGGATTCGGCGCGAGCGCCTTGTCCGGCCTACAATTTTCACATATTTCATTGA GTTAATCGAAACCAGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKANEQGASWYRIITMYE DQQPDNWRVQAILYA
Sequences:
>Translated_95_residues MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKANEQGASWYRIITMYE DQQPDNWRVQAILYA >Mature_95_residues MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKANEQGASWYRIITMYE DQQPDNWRVQAILYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BhsA/McbA family [H]
Homologues:
Organism=Escherichia coli, GI87082385, Length=91, Percent_Identity=98.9010989010989, Blast_Score=185, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009923 - InterPro: IPR010854 [H]
Pfam domain/function: PF07338 DUF1471 [H]
EC number: NA
Molecular weight: Translated: 10423; Mature: 10423
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERI CCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHCEEEEECCCCCHHHHHHE VALKANEQGASWYRIITMYEDQQPDNWRVQAILYA EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERI CCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHCEEEEECCCCCHHHHHHE VALKANEQGASWYRIITMYEDQQPDNWRVQAILYA EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]