The gene/protein map for NC_002678 is currently unavailable.
Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is trg [H]

Identifier: 187731514

GI number: 187731514

Start: 1503131

End: 1503301

Strand: Direct

Name: trg [H]

Synonym: SbBS512_E1646

Alternate gene names: 187731514

Gene position: 1503131-1503301 (Clockwise)

Preceding gene: 187734260

Following gene: 187730295

Centisome position: 32.56

GC content: 55.56

Gene sequence:

>171_bases
GTGACGCAACAGAATGCTTCTCTGGTAGAAGAGGCCTCAGCGGCGGCGGTGTCCCTTGAAGAACAGGCGGCACGATTAAC
TGAGGCGGTGGATGTATTCCGTCTGAACAAACATTCTGTGTCGGCAGAACCTCGCGGAGCGGGTGAACCAGTTAGTTTCG
CTACGGTGTGA

Upstream 100 bases:

>100_bases
TATCTGACACTTTGGTTCCCACTACTTATTTGGTGGACACCACTTTGTCTAATTCGTCAGATTCTGACCAGACGGTTCAG
GCTGTACGCTTACGGATAAG

Downstream 100 bases:

>100_bases
AAATGTTCAAGGAGGGATCGACAGATCCCTTCACCTTTCAGAACGGCATTGATTTTCGAATAGCGTTAATCATCAACTGG
CAACCAGAAGAGAACATCGC

Product: methyl-accepting chemotaxis protein III

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGAGEPVSFATV

Sequences:

>Translated_56_residues
MTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGAGEPVSFATV
>Mature_55_residues
TQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGAGEPVSFATV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=56, Percent_Identity=96.4285714285714, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 5872; Mature: 5740

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGAGEPVSFATV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
TQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGAGEPVSFATV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]