| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is cysC
Identifier: 187731484
GI number: 187731484
Start: 2918283
End: 2918888
Strand: Direct
Name: cysC
Synonym: SbBS512_E3124
Alternate gene names: 187731484
Gene position: 2918283-2918888 (Clockwise)
Preceding gene: 187730850
Following gene: 187732098
Centisome position: 63.22
GC content: 52.15
Gene sequence:
>606_bases ATGGCGCTGCATGACGAAAACGTCGTCTGGCATAGCCATCCGGTCACTGTGCAACAACGCGAGCTACACCACTGTCATCG TGGTGTAGTGCTGTGGTTTACCGGCCTCTCTGGGTCCGGTAAATCAACGGTCGCCGGGGCGCTGGAGGAGGCGTTACATA AACTCGGCGTCAGTACGTATCTGCTGGATGGCGACAATGTTCGCCACGGATTATGCAGCGATCTCGGTTTTAGCGATGCC GATCGTAAAGAGAATATCCGTCGCGTCGGTGAAGTGGCGAATTTGATGGTTGAAGCCGGACTGGTGGTGCTGACCGCATT TATCTCGCCACACCGCGCCGAACGCCAGATGGTTCGCGAACGCGTAGGAGAAGGGCGCTTTATCGAAGTGTTTGTCGATA CGCCGCTGGCGATTTGCGAAGCCCGCGATCCCAAAGGCTTATATAAGAAAGCGCGTGCCGGTGAACTGCGCAACTTTACG GGAATAGATTCCGTTTACGAAGCGCCTGAATCGGCAGAAATTCATCTCAATGGTGAACAATTAGTAACAAATTTGGTACA GCAATTATTAGATCTGTTGAGACAGAACGATATTATCAGATCCTGA
Upstream 100 bases:
>100_bases TTGCGTCATCTGAATTCAGTGCATTCGAACTGGAATTGAATGCCCTGGTTCGTCGCCACTTTCCGCACTGGGGCGCGCGC GATTTGCTGGGGGATAAATA
Downstream 100 bases:
>100_bases GACACCACCGGGTTTCCATGCCCGGTTCGTCAAAGTAACAGGATCAAATATGCGTAATAGCCATAACATTACACTAACAA ATAACGACAGCCTTACTGAG
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MALHDENVVWHSHPVTVQQRELHHCHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDA DRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
Sequences:
>Translated_201_residues MALHDENVVWHSHPVTVQQRELHHCHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDA DRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS >Mature_200_residues ALHDENVVWHSHPVTVQQRELHHCHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDAD RKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTG IDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=201, Percent_Identity=50.7462686567164, Blast_Score=193, Evalue=1e-49, Organism=Homo sapiens, GI34447231, Length=201, Percent_Identity=49.7512437810945, Blast_Score=187, Evalue=5e-48, Organism=Homo sapiens, GI62912492, Length=201, Percent_Identity=49.7512437810945, Blast_Score=187, Evalue=5e-48, Organism=Escherichia coli, GI1789107, Length=201, Percent_Identity=99.5024875621891, Blast_Score=408, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17542422, Length=201, Percent_Identity=50.7462686567164, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6322852, Length=197, Percent_Identity=47.7157360406091, Blast_Score=188, Evalue=5e-49, Organism=Drosophila melanogaster, GI24667032, Length=200, Percent_Identity=47.5, Blast_Score=173, Evalue=5e-44, Organism=Drosophila melanogaster, GI24667028, Length=200, Percent_Identity=47.5, Blast_Score=173, Evalue=5e-44, Organism=Drosophila melanogaster, GI24667036, Length=200, Percent_Identity=47.5, Blast_Score=173, Evalue=5e-44, Organism=Drosophila melanogaster, GI24667040, Length=200, Percent_Identity=47.5, Blast_Score=173, Evalue=7e-44, Organism=Drosophila melanogaster, GI116007838, Length=200, Percent_Identity=47.5, Blast_Score=173, Evalue=8e-44, Organism=Drosophila melanogaster, GI24667044, Length=200, Percent_Identity=47.5, Blast_Score=173, Evalue=8e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22368; Mature: 22237
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHDENVVWHSHPVTVQQRELHHCHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTY CCCCCCCEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ HHCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECHHH LVTNLVQQLLDLLRQNDIIRS HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALHDENVVWHSHPVTVQQRELHHCHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTY CCCCCCEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ HHCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECHHH LVTNLVQQLLDLLRQNDIIRS HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA