Click here to switch to the map view.

The map label for this gene is ybiJ

Identifier: 187731384

GI number: 187731384

Start: 2351694

End: 2351924

Strand: Direct

Name: ybiJ

Synonym: SbBS512_E2550

Alternate gene names: 187731384

Gene position: 2351694-2351924 (Clockwise)

Preceding gene: 187733403

Following gene: 187733427

Centisome position: 50.95

GC content: 51.95

Gene sequence:

>231_bases
ATGGCTCTTTCAACTCTATCATTTGGCGTGTTCGCGGCGGAACCGGTAACGGCATCCCAGGCACAGAACATGAATAAAAT
CGGCGTGGTTTCTGCCGATGGCGCATCCACCCTCGATGCCCTGGAAGCGAAACTGGCTGAGAAAGCCGCGGCAGCCGGTG
CCAGTGGATACAGCATCACTTCTGCCACCAACAACAATAAATTAAGCGGTACTGCGGTAATTTATAAGTAA

Upstream 100 bases:

>100_bases
ATCTCTCGAAAAAAAACGTGATACTCATCACATCGACGAAACAACGTCACTTATACAAAAATCACCTGCGAGAGATTAAT
TATATACTGTTGTTGCTGCT

Downstream 100 bases:

>100_bases
TTCGTAGGACAGATAAGGCGTTTACGCCGCATCCGGCAACAGATGCCTGATGCGACGCTACCGCGTCTTATCAGGCCTAC
AAAATCCGAACCGTTGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK

Sequences:

>Translated_76_residues
MALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK
>Mature_75_residues
ALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family

Homologues:

Organism=Escherichia coli, GI1787021, Length=76, Percent_Identity=100, Blast_Score=147, Evalue=1e-37,
Organism=Escherichia coli, GI87081785, Length=74, Percent_Identity=48.6486486486487, Blast_Score=64, Evalue=1e-12,
Organism=Escherichia coli, GI1787355, Length=74, Percent_Identity=47.2972972972973, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBIJ_ECOL6 (P0AAX4)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_752816.1
- ProteinModelPortal:   P0AAX4
- SMR:   P0AAX4
- EnsemblBacteria:   EBESCT00000040552
- GeneID:   1037831
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c0886
- GeneTree:   EBGT00050000009057
- HOGENOM:   HBG677470
- OMA:   ITSTEHR
- ProtClustDB:   PRK10259
- InterPro:   IPR010854

Pfam domain/function: PF07338 DUF1471

EC number: NA

Molecular weight: Translated: 7538; Mature: 7407

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSIT
CCCCCCCCCEEECCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEE
SATNNNKLSGTAVIYK
ECCCCCCCCCEEEEEC
>Mature Secondary Structure 
ALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSIT
CCCCCCCCEEECCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEE
SATNNNKLSGTAVIYK
ECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157