| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is phnH [H]
Identifier: 187731339
GI number: 187731339
Start: 4296828
End: 4297121
Strand: Reverse
Name: phnH [H]
Synonym: SbBS512_E4602
Alternate gene names: 187731339
Gene position: 4297121-4296828 (Counterclockwise)
Preceding gene: 187733940
Following gene: 187730036
Centisome position: 93.09
GC content: 57.14
Gene sequence:
>294_bases ATGACCCTGGAAACCGCTTTTATGCTTCCTGTGCAGGATGCCCAGCACAGTTTTCGTCGCCTGTTAAAGGCCATGAGCGA GCCGGGCGTGATTGTCGCCCTGCATCAGCTCAAACGCGGCTGGCAGCCGCTGAATATCGCCACCACCAGCGTGCTGCTGA CGCTGGCTGATAACGACACGCCGGTGTGGCTTTCCGCGCCATTAAGTAACGATATCGTCAGCCAGAGCCTGCGTTTTCAT ACCAACGCGCCGCTGGTCAATCAGCCGGGTGATGCTGCCAACTTACTGATTTAG
Upstream 100 bases:
>100_bases CCCCACTGGACGCTGACCGTATGGCACGCATTGCCGCACGCCAGGCCGAAGTGAACGCCAGCCGGGTCGACTTCTTTACG ATGGTTCGCGGAGACAACGC
Downstream 100 bases:
>100_bases TGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG TGCGTAACGGCAAAAGCACT
Product: protein PhnH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFH TNAPLVNQPGDAANLLI
Sequences:
>Translated_97_residues MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFH TNAPLVNQPGDAANLLI >Mature_96_residues TLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHT NAPLVNQPGDAANLLI
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnH family [H]
Homologues:
Organism=Escherichia coli, GI1790538, Length=92, Percent_Identity=93.4782608695652, Blast_Score=177, Evalue=8e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008772 [H]
Pfam domain/function: PF05845 PhnH [H]
EC number: NA
Molecular weight: Translated: 10641; Mature: 10510
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT CCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCEEEEEEEEEECCCCC PVWLSAPLSNDIVSQSLRFHTNAPLVNQPGDAANLLI CEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCEEEEEEEEEECCCCC PVWLSAPLSNDIVSQSLRFHTNAPLVNQPGDAANLLI CEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]