Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yjeH [H]

Identifier: 187731298

GI number: 187731298

Start: 4365641

End: 4366897

Strand: Reverse

Name: yjeH [H]

Synonym: SbBS512_E4670

Alternate gene names: 187731298

Gene position: 4366897-4365641 (Counterclockwise)

Preceding gene: 187732449

Following gene: 187730882

Centisome position: 94.6

GC content: 51.95

Gene sequence:

>1257_bases
ATGAGTGGACTCAAACAAGAACTGGGGCTGGCCCAGGGCATTGGCCTGCTATCGACGTCATTATTAGGCACCGGCGTGTT
TGCCGTTCCTGCGTTAGCTGCACAGGTAGCAGGCAATAACAGCCTGTGGGCGTGGCCCGTTTTGATTATCTTAGTGTTCC
CGATTGCGATTGTGTTTGCGATTCTGGGTCGCCACTATCCCAGCGCAGGCGGTGTCGCGCACTTCGTCGGTATGGCGTTT
GGTTCGCGGCTTGAGCGAGTCACCGGCTGGTTGTTTTTATCGGTCATTCCCGTGGGTTTGCCAGCCGCGCTACAAATTGC
CGCCGGGTTCGGCCAGGCAATGTTTGGCTGGCATAGCTGGCAACTGTTGTTGGCAGAACTCGGTACGCTGGCGCTGGTGT
GGTATATCGGTACTCGCGGTGCCAGTTCCAGTGCTAATCTACAAACCGTTATTGCCGGACTTATCGTCGCGCTGATTGTC
GCTATCTGGTGGGCGGGCGATATCAAACCTGCGAATATCCCCTTCCCGGCACCTGGTAATATCGAACTTACCGGGTTATT
TGCTGCGTTATCAGTGATGTTCTGGTGTTTTGTCGGTCTGGAAGCATTTGCCCATCTTGCCTCGGAATTTAAAAATCCAG
AGCGTGATTTTCCTCGCGCATTGATGATTGGTCTGCTGCTGGCAGGATTAGTCTACTGGGGCTGTACGGTAGTCGTCTTA
CACTTCGACGCCTATGGTGAAAAAATGGCGGCGGCAGCATCGCTTCCAAAAATTGTAGTGCAACTGTTCGGTGTAGGAGC
GTTATGGATTGCCTGCGTGATTGGCTATCTGGCCTGCTTTGCCAGTCTCAACATTTATATACAGAGCTTCGCCCGCCTGG
TATGGTCGCAGGCGCAACATAATCCTGACCACTACCTGGCACGCCTCTCTTCTCGCCATATCCCGAATAATGCCCTCAAT
GCGGTGCTCGGCTGCTGTGTGGTGAGCACTTTGGTGATTCATGCTTTAGAGATCAATCTGGACGCTCTTATTATTTATGC
CAATGGCATCTTTATTATGATTTATCTGTTATGCATGCTGGCAGGCTGTAAATTATTGCAAGGACGTTATCGACTACTGG
CGGTGGTTGGCGGGCTGTTATGCGTTCTGTTACTGGCAATGGTCGGCTGGAAAAGTCTCTATGCGCTGATCGTGCTGGCG
GGATTATGGCTGTTGCTGCCAAAACGAAAAACGCCGGAAAATGGCATAACCACATAA

Upstream 100 bases:

>100_bases
CATCGCAATTTCTTCATCGCCGTCATAAGCGAATCTGATTGTGCTACCATCGAAAATCTACGCAGTTGCCCAAAATTTGG
GCGCAATCGGATATCAACCC

Downstream 100 bases:

>100_bases
TCCGGCGTTTCGACATTAATCCTGGCGATCGTCTTTATGATCAAGGCGGTCGCGCTCATCATCCTTTCGCTGGTACTCAC
CATCAAAAGTATTACCGCCA

Product: inner membrane protein YjeH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAF
GSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIV
AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVL
HFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALN
AVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIVLA
GLWLLLPKRKTPENGITT

Sequences:

>Translated_418_residues
MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAF
GSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIV
AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVL
HFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALN
AVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIVLA
GLWLLLPKRKTPENGITT
>Mature_417_residues
SGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFG
SRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVA
IWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLH
FDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNA
VLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIVLAG
LWLLLPKRKTPENGITT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790584, Length=418, Percent_Identity=99.5215311004785, Blast_Score=818, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 44761; Mature: 44630

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWAWPVLIILVFPIAIVFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSW
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
QLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGN
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
IELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCML
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
AGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIVLAGLWLLLPKRKTPENGITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]