Click here to switch to the map view.

The map label for this gene is ychM

Identifier: 187731279

GI number: 187731279

Start: 1248664

End: 1250343

Strand: Reverse

Name: ychM

Synonym: SbBS512_E1370

Alternate gene names: 187731279

Gene position: 1250343-1248664 (Counterclockwise)

Preceding gene: 187731868

Following gene: 187732998

Centisome position: 27.09

GC content: 54.11

Gene sequence:

>1680_bases
GTGAACAAAATATTTTCCTCACATGTGATGCCTTTCCGCGCTCTGATCGACGCTTGCTGGAAAGAAAAATATACTGCCGC
ACGGTTTACCCGTGACCTGATTGCCGGGATAACCGTCGGGATTATTGCTATCCCGCTGGCGATGGCGTTGGCTATTGGTA
GTGGTGTGGCACCCCAGTACGGTTTATATACCGCAGCTGTTGCGGGGATTGTCATTGCTCTGACGGGTGGGTCACGCTTT
AGCGTTTCCGGTCCGACTGCGGCATTTGTGGTAATTCTCTATCCCGTGTCGCAACAGTTTGGACTGGCAGGACTGCTGGT
TGCGGCCTTGCTGTCGGGGATCTTTTTGATTCTGATGGGTCTGGCACGCTTTGGTCGCCTGATTGAGTATATTCCGGTTT
CCGTCACCTTAGGTTTCACCTCGGGTATCGGGATCACCATCGGTACCATGCAGATTAAAGATTTTCTCGGTCTGCAAATG
GTCCATGTCCCGGAACATTATCTACAAAAAGTCGGCGCATTATTTATGGCGCTGCCGACCATTAATGTGGGTGATGCTGC
CATTGGCATTGTGACGCTAGGTATTCTTGTTTTTTGGCCGCGTCTGGGCATTCGTTTACCCGGTCACCTTCCGGCCTTGC
TGGCTGGTTGCGCGGTGATGGGGATTGTTAACCTGCTCGGCGGACATGTTGCTACCATCGGTTCGCAATTCCACTACGTC
CTGGCCGATGGTTCTCAGGGTAACGGTATTCCGCAACTGCTGCCGCAACTGGTGCTGCCGTGGGATCTGCCTAATTCAGA
ATTCACGCTAACCTGGGATTCTATTCGCACACTGCTGCCTGCGGCATTCTCAATGGCAATGCTCGGCGCAATCGAATCTC
TGCTCTGCGCCGTGGTACTGGATGGTATGACCGGGACGAAACACAAGGCGAATAGCGAACTGGTTGGACAGGGACTGGGG
AATATTATCGCTCCATTCTTTGGTGGTATTACCGCTACAGCTGCCATCGCGCGTTCTGCCGCTAACGTCCGTGCCGGGGC
AACTTCCCCTATCTCAGCGGTGATCCACTCTATTCTGGTTATTCTTGCCCTGCTGGTACTGGCACCGCTGCTCTCCTGGC
TGCCGCTTTCCGCTATGGCAGCCCTGCTGTTGATGGTGGCGTGGAACATGAGTGAAGCGCATAAAGTGGTCGACTTGCTG
CGTCATGCACCGAAAGATGACATCATTGTCATGCTGCTGTGCATGTCGCTGACCGTGCTGTTTGATATGGTTATTGCCAT
CAGCGTGGGGATCGTGCTGGCATCGCTGCTGTTTATGCGTCGTATCGCACGTATGACTCGCCTGGCACCGGTAGTCGTAG
ATGTTCCAGACGATGTTCTGGTACTGCGCGTTATTGGCCCGCTGTTTTTTGCTGCTGCTGAAGGCTTGTTCACGGACCTG
GAGTCACGTCTTGAAGGCAAACGGATTGTGATTCTGAAGTGGGATGCCGTTCCGGTACTTGATGCTGGTGGTCTTGATGC
GTTCCAGCGTTTTGTGAAGCGTCTGCCCGAAGGATGTGAACTGCGCGTGTGCAACGTGGAATTCCAGCCACTGCGCACTA
TGGCTCGCGCAGGCATTCAACCGATCCCGGGACGCCTCGCGTTCTTCCCGAATCGTCGCGCGGCGATGGCGGATTTATAA

Upstream 100 bases:

>100_bases
GCGGCGGGTTTTTTTGTCTGTAATATCCATTTGTATGACCTATGCCTCCTTCACCTGCCATTTAGTTGACAGATGATGCG
CTCACGGATGAAACATTATT

Downstream 100 bases:

>100_bases
GTACGAGATTGACCAGTCAGCGCAAACTGACTGGTCAGCAAACTGCATTATTTGTTAGCTATGACGGCGATTATCGCTAC
GGCGGCAACGTTTGTCATAG

Product: putative sulfate transporter YchM

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
VHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYV
LADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLG
NIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLL
RHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDL
ESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL

Sequences:

>Translated_559_residues
MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
VHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYV
LADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLG
NIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLL
RHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDL
ESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL
>Mature_559_residues
MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
VHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYV
LADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLG
NIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLL
RHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDL
ESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL

Specific function: Possible sulfate transporter [H]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=503, Percent_Identity=27.2365805168986, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI262206075, Length=503, Percent_Identity=27.2365805168986, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI262206069, Length=503, Percent_Identity=27.2365805168986, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI262206063, Length=503, Percent_Identity=27.2365805168986, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI4557535, Length=492, Percent_Identity=22.9674796747967, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI94721259, Length=482, Percent_Identity=23.2365145228216, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI94721257, Length=482, Percent_Identity=23.2365145228216, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI94721253, Length=482, Percent_Identity=23.2365145228216, Blast_Score=83, Evalue=9e-16,
Organism=Homo sapiens, GI94721255, Length=482, Percent_Identity=23.2365145228216, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4505697, Length=433, Percent_Identity=22.8637413394919, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI45827800, Length=389, Percent_Identity=22.6221079691517, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI39752683, Length=389, Percent_Identity=22.6221079691517, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI45827802, Length=402, Percent_Identity=21.6417910447761, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI20336282, Length=527, Percent_Identity=21.2523719165085, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI16306483, Length=527, Percent_Identity=21.4421252371917, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI47131207, Length=545, Percent_Identity=23.8532110091743, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI20336272, Length=545, Percent_Identity=23.8532110091743, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI269784651, Length=379, Percent_Identity=22.9551451187335, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI100913030, Length=478, Percent_Identity=23.4309623430962, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081859, Length=559, Percent_Identity=99.6422182468694, Blast_Score=1102, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17566848, Length=569, Percent_Identity=24.6045694200351, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI193203292, Length=384, Percent_Identity=23.1770833333333, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323121, Length=456, Percent_Identity=24.1228070175439, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319771, Length=181, Percent_Identity=30.939226519337, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85815873, Length=479, Percent_Identity=25.8872651356994, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19922482, Length=423, Percent_Identity=25.531914893617, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24663084, Length=443, Percent_Identity=27.765237020316, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21357695, Length=443, Percent_Identity=27.765237020316, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24649801, Length=453, Percent_Identity=26.4900662251656, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21358229, Length=463, Percent_Identity=26.3498920086393, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24651449, Length=448, Percent_Identity=23.8839285714286, Blast_Score=102, Evalue=9e-22,
Organism=Drosophila melanogaster, GI21358633, Length=434, Percent_Identity=25.5760368663594, Blast_Score=100, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21355087, Length=171, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24647160, Length=178, Percent_Identity=30.8988764044944, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59428; Mature: 59428

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
GLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVAALLSGIFLILMG
HHHHHHHHHHEEEEECCCEEECCCCCCEEEEEEEECCHHHCHHHHHHHHHHHHHHHHHHH
LARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMVHVPEHYLQKVGALFMALPT
HHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCC
INVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEE
LADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVL
EECCCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGMTGTKHKANSELVGQGLGNIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQ
HHHCCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCC
PIPGRLAFFPNRRAAMADL
CCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
GLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVAALLSGIFLILMG
HHHHHHHHHHEEEEECCCEEECCCCCCEEEEEEEECCHHHCHHHHHHHHHHHHHHHHHHH
LARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMVHVPEHYLQKVGALFMALPT
HHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCC
INVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEE
LADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVL
EECCCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGMTGTKHKANSELVGQGLGNIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQ
HHHCCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCC
PIPGRLAFFPNRRAAMADL
CCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]