| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is hcp
Identifier: 187731053
GI number: 187731053
Start: 2260705
End: 2262357
Strand: Direct
Name: hcp
Synonym: SbBS512_E2458
Alternate gene names: 187731053
Gene position: 2260705-2262357 (Clockwise)
Preceding gene: 187730446
Following gene: 187733241
Centisome position: 48.98
GC content: 54.33
Gene sequence:
>1653_bases ATGTTTTGTGTGCAATGTGAACAAACTATCCGTACTCCGGCAGGAAACGGCTGCTCATACGCGCAGGGGATGTGTGGTAA AACGGCGGAAACTTCTGACCTTCAGGATTTACTCATCGCGGCGCTGCAAGGGCTTTCTGCCTGGGCGGTAAAAGCGCGTG AATACGGCATCATCAACCACGATGTTGACAGCTTCGCGCCACGTGCCTTTTTCTCAACCCTGACCAACGTTAACTTCGAT TCTCCGCGTATTGTCGGCTACGCTCGTGAAGCGATTGCCTTGCGCGAGGCGCTGAAAGCACAATGCCTGGCTGTAGATGC CAACGCGCGCGTCGATAACCCGATGGCTGACCTGCAACTGGTGAGCGATGATCTCGGCGAGCTGCAACGTCAGGCAGCAG AATTTACCCCTAACAAAGATAAAGCGGCGATTGGCGAAAACATTCTCGGCCTGCGTCTGCTGTGCCTGTATGGCCTGAAA GGTGCGGCGGCCTATATGGAACACGCGCATGTTCTCGGTCAATACGACAACGATATTTATGCCCAGTACCATAAAATCAT GGCGTGGCTGGGGACCTGGCCTGCCGATATGAACGCGCTTCTTGAGTGTTCAATGGAAATCGGCCAGATGAACTTCAAAG TGATGAGCATTCTGGATGCAGGCGAAACCGGTAAATACGGTCACCCGACGCCAACCCAGGTCAACGTCAAAGCGACGGCG GGTAAATGCATTCTGATTTCCGGTCACGATCTCAAAGATCTCTACAACCTGCTGGAACAGACCGAAGGCACGGGCGTTAA TGTCTACACCCACGGCGAAATGCTGCCTGCGCATGGCTACCCGGAGCTGCGTAAATTCAAGCATCTGGTCGGTAACTACG GCAGCGGCTGGCAGAATCAGCAAGTGGAGTTCGCTCGTTTCCCTGGCCCCATCGTGATGACCTCGAACTGCATCATCGAC CCAACCGTAAGCGCTTATGACGATCGTATCTGGACCCGCAGCATTGTTGGCTGGCCTGGCGTGCGTCATCTGGACGGTGA TGATTTCTCTGCGGTTATCACCCAAGCGCAACAGATGGCAGGCTTCCCGTACAGCGAAATTCCGCACCTTATCACCGTGG GTTTTGGTCGCCAGACGCTGCTTGGCGCTGCTGATACGCTGATTGATCTGGTGAGCCGTGAAAAACTGCGTCATATCTTC CTGCTTGGTGGCTGTGACGGCGCACGCGGCGAGCGCCACTACTTCACCGATTTCGCCACCATCGTGCCGGATGACTGCCT GATCCTGACCCTCGCCTGTGGTAAATATCGCTTTAACAAACTTGAGTTTGGCGATATCGAAGGTCTGCCCCGTCTGGTAG ATGCAGGTCAATGTAACGATGCTTACTCAGCGATTATTCTGGCTGTCACTCTGGCAGAGAAACTGGGCTGTGGTGTGAAC GATCTGCCGCTGTCGCTGGTGCTCTCCTGGTTTGAACAGAAAGCGATCGTCATTCTGCTGACGCTGCTTTCTCTGGGCGT GAAAAATATCGTCACCGGCCCGACTGCACCTGGTTTCCTGACACCAGACCTGCTGGCGGTGCTGAACGAGAAATTCGGCC TGCGTTCTATCACCACTGTTGAAGAAGACATGAAGCAACTGTTGAGCGCGTAA
Upstream 100 bases:
>100_bases TCAATCTCCCTTAAAGTTGCATGAAAAATCCCTTTTATCCCCGCGTTAAGCGTCTTAACCTTAAACATGTATATTAAATA TAACTTTAAAAGGTGTGATC
Downstream 100 bases:
>100_bases GGAGTTTGTCGATGACGATGCCAACGAATCAATGCCCGTGGCGGATGCAGGTTCATCACATTACGCAAGAAACGCCGGAT GTGTGGACGATTTCCCTGAT
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP [H]
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFD SPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIID PTVSAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIF LLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
Sequences:
>Translated_550_residues MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFD SPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIID PTVSAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIF LLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA >Mature_550_residues MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFD SPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIID PTVSAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIF LLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O [H]
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family [H]
Homologues:
Organism=Escherichia coli, GI87081794, Length=550, Percent_Identity=99.6363636363636, Blast_Score=1135, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: NA
Molecular weight: Translated: 60121; Mature: 60121
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINH CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCC DVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQL CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHH VSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIY HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH AQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECC GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQ CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCC QVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMA CEEHEECCCCEEEECCEEECCCHHHHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC GFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFAT CCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEHHHHH IVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN HCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTV CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH EEDMKQLLSA HHHHHHHHCC >Mature Secondary Structure MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINH CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCC DVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQL CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHH VSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIY HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH AQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECC GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQ CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCC QVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMA CEEHEECCCCEEEECCEEECCCHHHHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC GFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFAT CCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEHHHHH IVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN HCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTV CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH EEDMKQLLSA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA