| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is ycfT [H]
Identifier: 187730870
GI number: 187730870
Start: 2006533
End: 2007606
Strand: Direct
Name: ycfT [H]
Synonym: SbBS512_E2208
Alternate gene names: 187730870
Gene position: 2006533-2007606 (Clockwise)
Preceding gene: 187731302
Following gene: 187730283
Centisome position: 43.47
GC content: 49.44
Gene sequence:
>1074_bases ATGAAACAAAAAGAGCTATGGATTAACCAGATCAAAGGGTTATGTATTTGTCCGGTGGTGATTTATCACTCGGTCATTAC CTTTTATCCGCATATGACCACTTTTCAGCATCCGTTATCGGAAGTCCTGAGCAAATGCTGGATCTATTTCAATCTTTACC TTGCACCCTTTCGTATGCCGGTTTTTTTCTTTATATCCGGCTATTTGATTCGCCGCTATATCGACAGCGTACCGTGGGGA AATTGTCTCGATAAACGGATCTGGAACATCTTCTGGGTGCTGGCGCTTTGGGGCGTGGTGCAGTGGCTGGCGTTAAGTGC GCTGAACCAGTGGCTGGCACCTGAGCGCGATTTAAGCAATGCCTCCAATGCCGCTTATGCCGATTCCACCGGTGAGTTCC TGCACGGGATGATCACCGCCAGCACCAGCTTGTGGTATCTGTATGCGTTAATTGTCTATTTCGTGGTATGTAAAATTTTT AGCCGTCTGGCGCTGCCACTATTCGCCTTGTTTGTACTGCTGAGTGTGGCGGTTAATTTCGTTCCCACGCCGTGGTGGGG AATGAACAGTGTGATCCGCAATTTGCCTTATTACAGCCTTGGCGCATGGTTTGGCGCAACAATAATGACCTGTGTTAAAG AGGTACCGTTGCGCCGCCATCTGCTGATGGCTTCTTTGCTTACCGTTCTGGCGGTCGGTGCCTGGTTGTTTACTATCTCG CTGCTGTTGTCGCTGGTATCGATTGTGGTGATCATGAAGCTGTTTTATCAGTACGAGCAACGATTCGGTATGCGCTCCAC CAGCCTGCTGAATGTGATTGGCTCCAACACCATTGCTATCTACACCACCCATCGCATTCTGGTTGAAATATTCAGCTTAA CTCTGCTTGCGCAAATGAACGCAGCACGCTGGTCGCCGCAAGTCGAACTGACACTCCTGCTGGTTTATCCCTTTGTCAGT TTGTTCATCTGTACTGTTGCGGGCTTGCTGGTAAGAAAACTTTCACAGCGTGCATTCAGCGATCTGTTGTTCTCCCCGCC TTCACTGCCCGCTGCCGTCAGTTACTCCCGCTAA
Upstream 100 bases:
>100_bases AATCTGAAAAATCATCCAATACAGACAGATACCCATTACACCTCGGGTCATAACCCGCAGGATCAACCGCATGTAAATTA AAAAAGAGCGTGTTGTCCTG
Downstream 100 bases:
>100_bases GCCATCGCCCCAGCCGGGGCGATTCAATTTGCTAAACCATGTCGATTACGGATAATGAACAGCATTGCTTATCAGAGATA TGCCCCCATATGTTGAGGCA
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWG NCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVS LFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR
Sequences:
>Translated_357_residues MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWG NCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVS LFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR >Mature_357_residues MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWG NCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVS LFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR
Specific function: Unknown
COG id: COG4763
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787359, Length=357, Percent_Identity=99.4397759103641, Blast_Score=714, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 40836; Mature: 40836
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFQHPLSEVLSKCWIYFNLYLAPFRMP CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH AARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFQHPLSEVLSKCWIYFNLYLAPFRMP CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH AARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]