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The map label for this gene is nohA [C]

Identifier: 187730845

GI number: 187730845

Start: 1170326

End: 1170745

Strand: Reverse

Name: nohA [C]

Synonym: SbBS512_E1282

Alternate gene names: 187730845

Gene position: 1170745-1170326 (Counterclockwise)

Preceding gene: 187733981

Following gene: 187732666

Centisome position: 25.36

GC content: 46.9

Gene sequence:

>420_bases
GTGGCTACGCAGACTGAAGTTGCCAGGCATTTAAGTCTGACCGATCGCCAGCTTCGCAGATTGCAGAAATTGCCGGGTGC
CCCGATATCGAATAAGCGAGGGCAACTGGATCTGGATGCCTGGCGCGATTTTTACATATCGTATCTGAGAAGAAGTAAAA
ACGATGTGCCTGATGGCGATAGCGAAGACGACTATGAGGAAAAATTGCTTATTGCCAGATGGGAACTGACAGCAGAACAG
GCTGTTACACAGCAGTTAAAAAATGAGGTGTCAAAAGGAAAACTTATTGACACCGGGTTCTGTATTTTTGCCCTCAGCAA
GCTGGCAATGGCGTTATCCAGTACTCTTGATTCCATCCCTTTATCCATGCAACGACAGTTTCCTGGTAAGCGTAAACTGA
CCGCCGTATGTAGCCATTAA

Upstream 100 bases:

>100_bases
AGGTCTTCTGTGAACCGGACATGAACAAAAAATAGACATGTAAACCGGACATGACCGGTTTTGTTGTGATTGTGAGGTGA
GAGTTTTTGCGAGGTGAGGA

Downstream 100 bases:

>100_bases
GCCTGTATTGGTAACGTAGGTGCCCACCTTTTCAACTAGTGGACACCTGTTATGGAACAGAAAGCATTATCTGCAGAACC
CCGCAGATCATTTTCAAATG

Product: putative prophage Qin DNA packaging protein NU1

Products: NA

Alternate protein names: Terminase Small Subunit; Terminase Small Subunit Bacteriophage Origin

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQ
AVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPGKRKLTAVCSH

Sequences:

>Translated_139_residues
MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQ
AVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPGKRKLTAVCSH
>Mature_138_residues
ATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQA
VTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPGKRKLTAVCSH

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786773, Length=80, Percent_Identity=42.5, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15796; Mature: 15665

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
LSMQRQFPGKRKLTAVCSH
HHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure 
ATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
LSMQRQFPGKRKLTAVCSH
HHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA