Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is yceG [H]

Identifier: 187730726

GI number: 187730726

Start: 2026581

End: 2027603

Strand: Reverse

Name: yceG [H]

Synonym: SbBS512_E2227

Alternate gene names: 187730726

Gene position: 2027603-2026581 (Counterclockwise)

Preceding gene: 187733311

Following gene: 187732338

Centisome position: 43.93

GC content: 50.93

Gene sequence:

>1023_bases
ATGAAAAAAGTGTTATTGATTATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCG
CCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTGAAGCCAGGGACCGGACGTCTGGCGCTTG
GTGAACAGCTTTATGCCGATAAGATCATCAATCGCCCACGGGTTTTTCAATGGTTGCTGCGTATCGAACCGGATCTTTCT
CACTTTAAAGCCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCTGAAATTGCTGGAAAGCGGTAAAGA
AGCACAGTTCCCGCTGCGACTGGTAGAAGGGATGCGTCTGAGCGACTACCTCAAGCAATTGCGTGAGGCTCCGTATATCA
AGCACACGCTGAGTGACGATAAGTACGCCACCGTAGCGCAGGCACTTGAACTGGAAAACCCGGAGTGGATTGAAGGTTGG
TTCTGGCCAGACACCTGGATGTATACCGCCAATACCACCGATGTCGCGTTACTCAAGCGAGCGCACAAGAAAATGGTGAA
AGCGGTCGATAGCGCCTGGGAAGGGCGTGCGGACGGTCTGCCTTATAAAGATAAAAACCAGCTGGTGACGATGGCATCAA
TTATCGAAAAAGAAACCGCCGTTGCCAGTGAACGCGATCAGGTTGCCTCGGTATTTATCAACCGTTTACGCATTGGTATG
CGCCTGCAGACCGACCCAACCGTGATTTACGGGATGGGAGAGCGTTATAATGGCAAACTTTCTCGTGCAGACCTGGAAAC
GCCGACAGCGTATAACACCTATACCATTACCGGTTTGCCGCCAGGTGCGATAGCTACGCCGGGGGCGGATTCGCTGAAGG
CTGCTGCGCATCCGGCAAAAACGCCGTATCTCTATTTTGTGGCCGATGGTAAAGGTGGTCACACGTTTAATACCAATCTT
GCCAGCCATAACAAGTCTGTGCAGGATTATCTGAAAGTGCTTAAGGAAAAAAATGCGCAGTAA

Upstream 100 bases:

>100_bases
TAATGCCAGTGATGCCCGTACGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTT
TGTGAGCGCCCGAATTAGTC

Downstream 100 bases:

>100_bases
GTATATCGTCATTGAGGGGCTGGAAGGCGCAGGCAAAACTACCGCGCGTAATGTGGTGGTTGAGACGCTTGAGCAACTGG
GTATCCGCGACATGGTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLS
HFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM
RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNL
ASHNKSVQDYLKVLKEKNAQ

Sequences:

>Translated_340_residues
MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLS
HFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM
RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNL
ASHNKSVQDYLKVLKEKNAQ
>Mature_340_residues
MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLS
HFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM
RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNL
ASHNKSVQDYLKVLKEKNAQ

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=340, Percent_Identity=99.7058823529412, Blast_Score=696, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 38248; Mature: 38248

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYAD
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECEEEEECCCCCCCHHHHHHHHH
KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL
HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCH
SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR
HHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHH
AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCC
TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ
CCEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYAD
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECEEEEECCCCCCCHHHHHHHHH
KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL
HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCH
SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR
HHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHH
AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCC
TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ
CCEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1644759; 8631667 [H]