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The map label for this gene is yadD [H]

Identifier: 187730637

GI number: 187730637

Start: 138383

End: 139279

Strand: Direct

Name: yadD [H]

Synonym: SbBS512_E0125

Alternate gene names: 187730637

Gene position: 138383-139279 (Clockwise)

Preceding gene: 187733674

Following gene: 187730081

Centisome position: 3.0

GC content: 48.83

Gene sequence:

>897_bases
ATGGATGCACCGAGTACCACACCGCATGATGCAGTGTTTAAACAATTTTTAATGCACGCGGAGACGGCTCGCGACTTTCT
GGAGATACATTTGCCAGTGGAATTACGAGAACTTTGTGACCTCAACACGCTTCATTTAGAGTCGGGGAGTTTCATTGAAG
AGAGCCTGAAAGGACACAGCACGGACGTGCTCTATTCCGTGCAAATGCAGGGCAATCCCGGTTATCTGCATGTTGTGATT
GAACACCAAAGCAAGCCGGATAAGAAAATGGCCTTTCGCATGATGCGTTATTCTATTGCTGCCATGCACCGGCATCTGGA
GGCGGATCACGATAAGCTGCCGCTGGTGGTGCCGATACTGTTTTATCAGGGCGAGGCCACACCTTATCCGCTCTCAATGT
GCTGGTTTGATATATTTTACTCGCCGGAGCTGGCACGACGCGTCTATAACAGTCCTTTCCCGCTGGTGGATATCACCATC
ACACCGGATGACGAAATCATGCAACATCGGCGGATTGCGATTCTCGAACTACTGCAAAAACATATTCGCCAGCGCGACTT
AATGTTATTGCTGGAGCAACTGGTCACGCTGATTGACGAAGGGTACACTAGCGGAAGTCAGTTAGTTGCCATGCAAAACT
ATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTATGGTGTGCTGAGAGACAGGGAAACGGGAGGGGAGTCT
ATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAGGAAAGGCAAGA
ATTCGCCCAGCGTTTTCTGAGTAAAGGGATGTCTCGGGAAGACGTTGCAGAGATGACAAATTTATCTCTTGCTGAGATTG
ATAGGCTGATTAACTAA

Upstream 100 bases:

>100_bases
TTCTCTGAACGCTGCTCGGTAAATACTAAAGAGGTGGCTGACGATGGCACGCCTTGACTGGATACTGCCTTCACGCAAGA
CAACACGGAAGGCAGGGAAG

Downstream 100 bases:

>100_bases
GTTGTCTGCGTTATGAATAATTGCTTACAGACGCCATCGCCATGACGTGGGGCAAATTAATAATTGGCGCCATCAGCCGT
AGCGCCAGTTATACTCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES
MMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKGMSREDVAEMTNLSLAEIDRLIN

Sequences:

>Translated_298_residues
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES
MMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKGMSREDVAEMTNLSLAEIDRLIN
>Mature_298_residues
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES
MMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKGMSREDVAEMTNLSLAEIDRLIN

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1786324, Length=298, Percent_Identity=97.3154362416107, Blast_Score=604, Evalue=1e-174,
Organism=Escherichia coli, GI1788643, Length=286, Percent_Identity=54.1958041958042, Blast_Score=317, Evalue=9e-88,
Organism=Escherichia coli, GI1788577, Length=293, Percent_Identity=50.8532423208191, Blast_Score=300, Evalue=7e-83,
Organism=Escherichia coli, GI1789816, Length=290, Percent_Identity=49.3103448275862, Blast_Score=291, Evalue=5e-80,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 34558; Mature: 34558

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHCCCC
TDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPIL
CEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK
EECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
MMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKGMSREDVAEMTNLSLAEIDRLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHCCCC
TDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPIL
CEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK
EECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
MMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKGMSREDVAEMTNLSLAEIDRLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]