Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is 187730589

Identifier: 187730589

GI number: 187730589

Start: 1341592

End: 1342134

Strand: Direct

Name: 187730589

Synonym: SbBS512_E1471

Alternate gene names: NA

Gene position: 1341592-1342134 (Clockwise)

Preceding gene: 187732549

Following gene: 187730126

Centisome position: 29.06

GC content: 56.54

Gene sequence:

>543_bases
GTGAAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAACTGAGCGATGGCTGGTA
TCAGGTACGGATTGCCGGGCGGGATGCAGGAGAAACCGAATTATCATCCCGTCTTAATGAGCCGCTGGCAAATGGTGCCG
TGATCCACATCGTGCCGCGTCTTGCGGGAGCAAAAAGTGGCGGTGTGTTTCAGGCGGTGCTGGGTGCGGCGTTGATTGCT
ACGGCAATCTGGATGCCGGGGATCAGTATCGCTTTCAGTGACATTCTCTTTTCAATGGGTGCGGCGATGACGCTTGGTGG
TGTGGCGCAGATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGCAAACAGAACACCTATTTCT
CCTCACTGGATAACATGGTTGCCCAGGGCAATGTCCTGCCTGTTCTGTACGGTGAAATGCGCGTGGGGTCACGTGTGGCA
TCTCAGGAGATCAGCACGGCAGATGAAGGGGATGGTGGTCAGGTTGTGGTAATTGGGCGGTAA

Upstream 100 bases:

>100_bases
AATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGAATGGCACGCATCTGCCTTTACGGGGATTTGCAACGATTTG
GCCGCCGCATCGACCTTCGT

Downstream 100 bases:

>100_bases
TATTATTTTACTCATGTTCTAACTAATTTAATATTTATATCGAACACTGATAATTATTCTATTGGTTAGCTATATGAACA
AAACGATTTTATTCTGCACG

Product: bacteriophage lambda tail assembly protein I

Products: NA

Alternate protein names: Bacteriophage Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly Protein I; Bacteriophage Tail Protein; Tail Assembly Protein I; Lambda Tail Assembly I; Phage-Related Protein Tail Component; Bacteriophage Protein; Tail Assembly Protein I Prophage; Prophage LambdaSo Tail Assembly Protein I; Phage Tail Assembly Protein I; Tail Assembly Protein; Phage Tail Component; Tail Assembly Protein I-Like; Phage Tail Protein; Gp63 Phage Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSSRLNEPLANGAVIHIVPRLAGAKSGGVFQAVLGAALIA
TAIWMPGISIAFSDILFSMGAAMTLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVA
SQEISTADEGDGGQVVVIGR

Sequences:

>Translated_180_residues
MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSSRLNEPLANGAVIHIVPRLAGAKSGGVFQAVLGAALIA
TAIWMPGISIAFSDILFSMGAAMTLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVA
SQEISTADEGDGGQVVVIGR
>Mature_180_residues
MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSSRLNEPLANGAVIHIVPRLAGAKSGGVFQAVLGAALIA
TAIWMPGISIAFSDILFSMGAAMTLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVA
SQEISTADEGDGGQVVVIGR

Specific function: Unknown

COG id: COG4723

COG function: function code S; Phage-related protein, tail component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18848; Mature: 18848

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSSRLNEPLANGAVIHIVPR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCHHHCCEEEEEECH
LAGAKSGGVFQAVLGAALIATAIWMPGISIAFSDILFSMGAAMTLGGVAQMLAPKARTPR
HCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVASQEISTADEGDGGQVVVIGR
CCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSSRLNEPLANGAVIHIVPR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCHHHCCEEEEEECH
LAGAKSGGVFQAVLGAALIATAIWMPGISIAFSDILFSMGAAMTLGGVAQMLAPKARTPR
HCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVASQEISTADEGDGGQVVVIGR
CCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA