| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is glnP
Identifier: 187730568
GI number: 187730568
Start: 2339593
End: 2340252
Strand: Direct
Name: glnP
Synonym: SbBS512_E2538
Alternate gene names: 187730568
Gene position: 2339593-2340252 (Clockwise)
Preceding gene: 187732473
Following gene: 187733795
Centisome position: 50.68
GC content: 53.33
Gene sequence:
>660_bases ATGCAGTTTGACTGGAGTGCCATCTGGCCTGCCATTCCGCTTCTGATTGAAGGTGCCAAAATGACCCTGTGGATTTCGGT CCTCGGTCTGGCTGGCGGTCTGGTAATCGGATTGCTGGCAGGTTTTGCACGCACCTTCGGTGGTTGGATAGCCAACCACG TCGCGCTGGTCTTTATTGAAGTGATCCGCGGCACACCTATCGTCGTCCAGGTGATGTTTATCTATTTCGCCCTGCCGATG GCGTTTAACGACTTACGCATCGACCCATTTACTGCGGCGGTGGTCACCATCATGATCAACTCCGGCGCGTACATTGCGGA AATCACGCGTGGTGCGGTGCTGTCTATTCACAAAGGTTTTCGTGAAGCAGGACTGGCGCTCGGTCTTTCACGTTGGGAAA CCATTCGCTACATCATTTTACCGCTGGCACTGCGTCGTATGCTGCCGCCGCTGGGTAACCAGTGGATCATCAGCATTAAA GACACCTCGCTGTTTATTGTTATCGGCGTGGCGGAACTGACCCGTCAGGGGCAAGAAATTATTGCCGGTAACTTCCGCGC CCTTGAGATCTGGAGCGCCGTGGCGGTGTTCTATCTGATTATTACCCTGGTGCTGAGCTTTATTCTGCGTCGTCTGGAAA GAAGGATGAAAATCCTGTGA
Upstream 100 bases:
>100_bases CCCCTCTGGGGAGAGGATTAGGGTGAGGGGCGCAAACCCGCTCCGGGGCCATTAATTACCCTGAATTTGATTATTTACAC CACGGTAACAGGAACAACAT
Downstream 100 bases:
>100_bases TTGAATTTAAAAACGTCTCCAAGCACTTTGGCCCAACCCAGGTGCTGCACAATATCGATTTGAACATTGCCCAGGGCGAA GTCGTGGTGATTATCGGGCC
Product: glutamine ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIK DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL
Sequences:
>Translated_219_residues MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIK DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL >Mature_219_residues MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIK DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=219, Percent_Identity=99.5433789954338, Blast_Score=427, Evalue=1e-121, Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=36.231884057971, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1786873, Length=227, Percent_Identity=31.2775330396476, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=27.5700934579439, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=31.0679611650485, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=27.3542600896861, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=31.8627450980392, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=23.0046948356808, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=26.7605633802817, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=30.5970149253731, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24379; Mature: 24379
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGF HHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHH REAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEHHHHHHCCHHH IAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGF HHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHH REAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEHHHHHHCCHHH IAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]