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The map label for this gene is ydeQ [H]

Identifier: 187730543

GI number: 187730543

Start: 1608359

End: 1608538

Strand: Reverse

Name: ydeQ [H]

Synonym: SbBS512_E1764

Alternate gene names: 187730543

Gene position: 1608538-1608359 (Counterclockwise)

Preceding gene: 187730858

Following gene: 187733823

Centisome position: 34.85

GC content: 44.44

Gene sequence:

>180_bases
GTGGGTGTCTCTCTGATGCGTAATGGAAAAATACTGGCTACGGGAGAAAATGTCTCCCTGGGGACAGTAAATAAAAGCAA
AGTATCTCTGGGTTTAAGCGCAACCTATGGACAAACAGGAAACAAGGTTGCAGCCGGAACCGTCCAGTCAGTCATTGGTG
TCACTTTTATCTATGAATAA

Upstream 100 bases:

>100_bases
ACTCAAGCTGGCAAACCGCGTGCAAATGAGCACGCCCTCTTTCCATCAACACTTCAGGCAGCTTGCGGGAATGAGTCCAC
TACGGTATCAGAAATGGGAA

Downstream 100 bases:

>100_bases
TTGTGATTTTGATCTTAGTCTATGCGCTCCATTCACGAAAATTGCGCGGATAATTATTTTGTGAAGGCTATTATCCTACA
CCTGTAAGAAAATCCGCGCA

Product: protein FimH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MGVSLMRNGKILATGENVSLGTVNKSKVSLGLSATYGQTGNKVAAGTVQSVIGVTFIYE

Sequences:

>Translated_59_residues
MGVSLMRNGKILATGENVSLGTVNKSKVSLGLSATYGQTGNKVAAGTVQSVIGVTFIYE
>Mature_58_residues
GVSLMRNGKILATGENVSLGTVNKSKVSLGLSATYGQTGNKVAAGTVQSVIGVTFIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787779, Length=59, Percent_Identity=93.2203389830508, Blast_Score=109, Evalue=4e-26,
Organism=Escherichia coli, GI1790775, Length=59, Percent_Identity=57.6271186440678, Blast_Score=68, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR015243 [H]

Pfam domain/function: PF00419 Fimbrial; PF09160 FimH_man-bind [H]

EC number: NA

Molecular weight: Translated: 6019; Mature: 5888

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSLMRNGKILATGENVSLGTVNKSKVSLGLSATYGQTGNKVAAGTVQSVIGVTFIYE
CCCCCCCCCEEEEECCCCEEECCCCCEEEEEEEECCCCCCCEEECCHHHHHHEEEEEEC
>Mature Secondary Structure 
GVSLMRNGKILATGENVSLGTVNKSKVSLGLSATYGQTGNKVAAGTVQSVIGVTFIYE
CCCCCCCCEEEEECCCCEEECCCCCEEEEEEEECCCCCCCEEECCHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]