| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is mngB [H]
Identifier: 187730502
GI number: 187730502
Start: 624215
End: 625465
Strand: Direct
Name: mngB [H]
Synonym: SbBS512_E0652
Alternate gene names: 187730502
Gene position: 624215-625465 (Clockwise)
Preceding gene: 187732566
Following gene: 187731907
Centisome position: 13.52
GC content: 49.64
Gene sequence:
>1251_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA GTTGGCAGCATTACCTGCAAATTGAAGAAAGCTCTGATGATGGTGATGAATATGACTATTCACCCGCAAAAGAAGAGTGG GTAATTACCGCAGCGAACGCGAAACCGCAATGCGATATTATTCATGAAGTCTGGCAGAGCAGGGCTGTTATCCGCTATGA CATGGCAGTGCCGCTCAATTTGTCAGAACGCAGCGCCCGGCAATCCACTGGCAGAGTAGGGATGGTGTTGGTTGTCACTC TTAGTCATAACAGCAGGCGTATTGATGTGGATATCAACCTTGATAACCAGGCTGACGATCATCGCCTTCGTGTCCTGGTC CCTACACCTTTTAACACCGACAGTGTTCTGGCAGATACGCAGTTTGGTTCGCTAACGCGCCCCGTGAACGACAGTGCAAT GAACAACTGGCAGCAAGAAGGCTGGAAAGAAGCGCCGGTTCCGGTATGGAATATGCTCAACTATGTTGCCTTACAGGAAG GGCGTAACGGCATGGCTGTCTTTAGCGAAGGGTTACGTGAATTTGAAGTCATCGGTGAAGAGAAGAAAACCTTTGCCATT ACGTTGCTGCGTGGCGTGGGCTTACTGGGCAAAGAAGATCTGCTTTTAAGGCCTGGGCGGCCTTCGGGAATTAAAATGCC AGTCCCGGACTCACAACTACGTGGTCTGCTTTCTTGTCGCCTAAGTTTATTGAGTTATACCGGTACGCCAACCGCCGCTG GTGTAGCTCAGCAGGCGCGAGCATGGCTGACTCCAGTACAGTGTTACAACAAAATCCCATGGGATGCGATGAAGCTCAAC AAAGCCGGATTCAACGTGCCGGAAAGTTATAGTTTGTTGAAAATGCCCCCAGTGGGATGCCTGATAAGCGCACTTAAGAA AGCTGAAGACCGACAAGAAGTGATTTTACGGCTGTTTAATCCGGCTGAATCAGCAACCTGTGATGCGACTGTTGCTTTCA GTCGCGAGGTGATTTCTTGCTCAGAAACGATGATGGATGAACACATTACCACCGAGGAAAATCAAGGTTCAAATCTATCG GGGCCTTTTTTACCCGGCCAGTCACGGACGTTCAGTTACCGGCTTGCCTGA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases ATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGGGCGCTTTGTTCATGCCGGATACGGCATGAA CGCTTTATTCGGTCTACAAA
Product: glycosy hydrolase, family 38
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLQIEESSDDGDEYDYSPAKEEW VITAANAKPQCDIIHEVWQSRAVIRYDMAVPLNLSERSARQSTGRVGMVLVVTLSHNSRRIDVDINLDNQADDHRLRVLV PTPFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAI TLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLN KAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLS GPFLPGQSRTFSYRLA
Sequences:
>Translated_416_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLQIEESSDDGDEYDYSPAKEEW VITAANAKPQCDIIHEVWQSRAVIRYDMAVPLNLSERSARQSTGRVGMVLVVTLSHNSRRIDVDINLDNQADDHRLRVLV PTPFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAI TLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLN KAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLS GPFLPGQSRTFSYRLA >Mature_415_residues PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLQIEESSDDGDEYDYSPAKEEWV ITAANAKPQCDIIHEVWQSRAVIRYDMAVPLNLSERSARQSTGRVGMVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVP TPFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAIT LLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNK AGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSG PFLPGQSRTFSYRLA
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=364, Percent_Identity=97.8021978021978, Blast_Score=719, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 45866; Mature: 45735
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLQ CCCHHHHHHEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEE IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEVWQSRAVIRYDMAVPLNLSERSAR EECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHH QSTGRVGMVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPTPFNTDSVLADTQFGSLTR HHCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCC PVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAI CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEE TLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQAR EEHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFN HHCCHHHHHCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCC PAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLQ CCHHHHHHEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEE IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEVWQSRAVIRYDMAVPLNLSERSAR EECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHH QSTGRVGMVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPTPFNTDSVLADTQFGSLTR HHCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCC PVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAI CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEE TLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQAR EEHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFN HHCCHHHHHCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCC PAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]