| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yebY [H]
Identifier: 187730472
GI number: 187730472
Start: 1924257
End: 1924598
Strand: Reverse
Name: yebY [H]
Synonym: SbBS512_E2114
Alternate gene names: 187730472
Gene position: 1924598-1924257 (Counterclockwise)
Preceding gene: 187732158
Following gene: 187733324
Centisome position: 41.69
GC content: 45.61
Gene sequence:
>342_bases ATGATGAAAAAAAGTATTCTGGCGTTTCTGTTACTCACCAGTTCTGCAGCGGCGCTGGCTGCACCGCAGGTGATTACCGT CAGTCGTTTTGAAGTGGGTAAAGACAAATGGGCGTTTAATCGCGAAGAGGTGATGCTGACTTGCCGACCGGGTAATGCTT TGTATGTTATTAATCCGAGTACCCTCGTGCAGTATCCTTTAAACGATATCGCACAAAAGGAAGTTGCCAGTGGGAAGACC AATGCCCAACCCATTTCGGTGATTCAGATTGATGATCCTAACAATCCCGGCAAAAAAATGAGTCTGGCACCGTTTATAGA ACGAGCTGAAAAACTCTGTTAA
Upstream 100 bases:
>100_bases GTTTGTGTGGATGACTAAACTCGAATGGGCGATAGGTGCGGTAGTGCTGGTGATCATCAGCCTGCTTGCGACTCTCGAAC CTTTTTGATGGATTACGAAA
Downstream 100 bases:
>100_bases TTACCTAAAATAGCCTTTTGATTTCCAATAAAAAAACCGCCTCAGTTCTTTCACCAGAACGGGCGGTTTTTAACATTTCA GCTGATGACCACCACGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKT NAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC
Sequences:
>Translated_113_residues MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKT NAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC >Mature_113_residues MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKT NAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788144, Length=113, Percent_Identity=99.1150442477876, Blast_Score=231, Evalue=8e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019648 [H]
Pfam domain/function: PF10709 DUF2511 [H]
EC number: NA
Molecular weight: Translated: 12378; Mature: 12378
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS CCHHHHHHHHHHHCCCHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCC TLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC CEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS CCHHHHHHHHHHHCCCHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCC TLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC CEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]