Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yebY [H]

Identifier: 187730472

GI number: 187730472

Start: 1924257

End: 1924598

Strand: Reverse

Name: yebY [H]

Synonym: SbBS512_E2114

Alternate gene names: 187730472

Gene position: 1924598-1924257 (Counterclockwise)

Preceding gene: 187732158

Following gene: 187733324

Centisome position: 41.69

GC content: 45.61

Gene sequence:

>342_bases
ATGATGAAAAAAAGTATTCTGGCGTTTCTGTTACTCACCAGTTCTGCAGCGGCGCTGGCTGCACCGCAGGTGATTACCGT
CAGTCGTTTTGAAGTGGGTAAAGACAAATGGGCGTTTAATCGCGAAGAGGTGATGCTGACTTGCCGACCGGGTAATGCTT
TGTATGTTATTAATCCGAGTACCCTCGTGCAGTATCCTTTAAACGATATCGCACAAAAGGAAGTTGCCAGTGGGAAGACC
AATGCCCAACCCATTTCGGTGATTCAGATTGATGATCCTAACAATCCCGGCAAAAAAATGAGTCTGGCACCGTTTATAGA
ACGAGCTGAAAAACTCTGTTAA

Upstream 100 bases:

>100_bases
GTTTGTGTGGATGACTAAACTCGAATGGGCGATAGGTGCGGTAGTGCTGGTGATCATCAGCCTGCTTGCGACTCTCGAAC
CTTTTTGATGGATTACGAAA

Downstream 100 bases:

>100_bases
TTACCTAAAATAGCCTTTTGATTTCCAATAAAAAAACCGCCTCAGTTCTTTCACCAGAACGGGCGGTTTTTAACATTTCA
GCTGATGACCACCACGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKT
NAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC

Sequences:

>Translated_113_residues
MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKT
NAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC
>Mature_113_residues
MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKT
NAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788144, Length=113, Percent_Identity=99.1150442477876, Blast_Score=231, Evalue=8e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019648 [H]

Pfam domain/function: PF10709 DUF2511 [H]

EC number: NA

Molecular weight: Translated: 12378; Mature: 12378

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS
CCHHHHHHHHHHHCCCHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCC
TLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC
CEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS
CCHHHHHHHHHHHCCCHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCC
TLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGKKMSLAPFIERAEKLC
CEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]