Click here to switch to the map view.

The map label for this gene is yfcC [H]

Identifier: 187730468

GI number: 187730468

Start: 2477612

End: 2479153

Strand: Direct

Name: yfcC [H]

Synonym: SbBS512_E2674

Alternate gene names: 187730468

Gene position: 2477612-2479153 (Clockwise)

Preceding gene: 187731078

Following gene: 187730285

Centisome position: 53.67

GC content: 51.69

Gene sequence:

>1542_bases
GTGCAAGGGAATATTTGCGCTATGTCCGCAATCACTGAATCCAAACCAACAAGAAGATGGGCAATGCCCGATACGTTGGT
GATTATCTTTTTTGTTGCTATTTTAACCAGCCTTGCCACCTGGGTAGTTCCGGTGGGGATGTTTGACAGTCAGGAAGTGC
AGTATCAGGTTGATGGTCAAACAAAAACACGCAAAGTCGTAGATCCACACTCATTTCGCATTCTGACTAACGAAGCAGGC
GAACCTGAGTATCACCGCATACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATT
AACCTCAGGATCGAAATACGGGACAGCTGTTGGCATCATCATGTTTATGCAGGTGATTGGCGGCGCGTTTGGCATTGTGA
TGCGTACAGGAACCATTGATAACGGTATCCTGGCGCTTATTCGCCATACCCGCGGGAATGAAATTCTCTTTATTCCTGCG
CTGTTTATTCTGTTTTCACTTGGCGGCGCGGTATTTGGTATGGGAGAAGAGGCCGTCGCCTTTGCCATTATCATCGCACC
GCTAATGGTCCGGCTGGGCTATGACAGTATTACCACCGTCCTGGTGACCTATATTGCCACGCAAATCGGTTTTGCCAGTT
CGTGGATGAACCCGTTTTGTGTGGTCGTTGCTCAGGGGATTGCCGGCGTTCCGGTGCTTTCTGGCTCCGGGTTGCGCATC
GTGGTGTGGGTTATCGCCACTATGATTGGCCTGATCTTTACCATGGTGTACGCCTCACGAGTGAAAAAGAATCCTCTTCT
GTCACGCGTGCATGAGTCCGACCGCTTCTTTCGTGAAAAGCAGGCGGATGTTGAACAACGTCCGTTTACCTTTGGTGACT
GGCTGGTATTGATTGTCCTGACCGCCGTAATGGTCTGGGTGATTTGGGGCGTGATCGTTAATGCCTGGTTTATTCCAGAA
ATTGCCAGCCAGTTCTTCACCATGGGTCTGGTGATTGGCATCATCGGCGTTGTTTTCCGCCTTAACGGCATGACGGTTAA
TACCATGGCTTCATCCTTTACCGAAGGGGCGCGAATGATGATCGCCCCTGCCCTGCTGGTGGGTTTCGCCAAAGGGATTT
TGCTGCTGGTCAGTAATGGTGAAGCGGGTGATGCCAGCGTGTTAAATACCATCCTCAACAGCATTGCCAATGCCATTAGC
GGTCTGGACAACGCGGTCGCGGCCTGGTTTATGTTGCTCTTCCAGGCGGTATTTAATTTCTTCGTGACGTCCGGTTCTGG
TCAGGCGGCGTTAACCATGCCGTTACTGGCACCGCTTGGCGATCTGGTCGGTGTTAACCGTCAGGTTACCGTGCTGGCAT
TCCAGTTTGGTGATGGCTTCAGTCACATCATTTACCCAACCTCAGCTTCGTTAATGGCAACTCTCGGTGTGTGCAGGGTG
GACTTCCGTAACTGGCTGAAGGTGGGCGCGCCCCTACTTGGACTGCTGTTTATTATGTCCAGCGTCGTAGTGATCGGCGC
TCAGTTGATGGGCTACCACTAA

Upstream 100 bases:

>100_bases
TATTCTCTTAATCTGCATTAATCCTTTCTGATTATCTTGCTTAACTGCGCTGCATCAATGAATTGCGCCATTTCACTTTG
CATACTTACCACTTTGTTTT

Downstream 100 bases:

>100_bases
AAATGTTAAGAGCCGCAATTGCGGCTCTTTTTTCATTCTGCCGTTTCAGTCTCTACGGCTTCATTTTTGGCATTGCGCTT
CATCCACAACGCCAGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MQGNICAMSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAG
EPEYHRIQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMQVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPA
LFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRI
VVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPE
IASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVSNGEAGDASVLNTILNSIANAIS
GLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRV
DFRNWLKVGAPLLGLLFIMSSVVVIGAQLMGYH

Sequences:

>Translated_513_residues
MQGNICAMSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAG
EPEYHRIQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMQVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPA
LFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRI
VVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPE
IASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVSNGEAGDASVLNTILNSIANAIS
GLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRV
DFRNWLKVGAPLLGLLFIMSSVVVIGAQLMGYH
>Mature_513_residues
MQGNICAMSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAG
EPEYHRIQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMQVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPA
LFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRI
VVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPE
IASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVSNGEAGDASVLNTILNSIANAIS
GLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRV
DFRNWLKVGAPLLGLLFIMSSVVVIGAQLMGYH

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=506, Percent_Identity=99.0118577075099, Blast_Score=1002, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 55588; Mature: 55588

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNICAMSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQ
CCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
TKTRKVVDPHSFRILTNEAGEPEYHRIQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGII
CCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
MFMQVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVA
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHCCCCHHHHH
FAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCHH
VVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
TAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCHHHH
IAPALLVGFAKGILLLVSNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNF
HHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRV
HEECCCCCEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHH
DFRNWLKVGAPLLGLLFIMSSVVVIGAQLMGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQGNICAMSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQ
CCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
TKTRKVVDPHSFRILTNEAGEPEYHRIQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGII
CCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
MFMQVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVA
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHCCCCHHHHH
FAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCHH
VVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
TAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCHHHH
IAPALLVGFAKGILLLVSNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNF
HHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRV
HEECCCCCEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHH
DFRNWLKVGAPLLGLLFIMSSVVVIGAQLMGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7883769 [H]