| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is mdoH
Identifier: 187730418
GI number: 187730418
Start: 2072468
End: 2075011
Strand: Reverse
Name: mdoH
Synonym: SbBS512_E2281
Alternate gene names: 187730418
Gene position: 2075011-2072468 (Counterclockwise)
Preceding gene: 187731000
Following gene: 187731964
Centisome position: 44.95
GC content: 54.64
Gene sequence:
>2544_bases ATGAATAAGACAACTGAGTACATTGACGCAATGCCCATCGCCGCAAGCGAGAAAGCGGCATTGCCGAAGAGTGATATCCG CGCCGTACATCAGGCGCTGGATGCCGAACACCGCACCTGGGCGCGGGAGGATGATTCCCCGCAAGGCTCGGTAAAGGCCC GTCTGGAACAAGCCTGGCCAGATTCACTTGCTGATGGACAGTTAATTAAAGACGACGAAGGGCGCGATCAGCTGAAGGCG ATGCCAGAAGCAAAACGCTCCTCGATGTTTCCCGACCCGTGGCGTACCAACCCGGTAGGCCGTTTCTGGGATCGCCTGCG TGGACGCGATGTCACGCCGCGCTATCTGGCTCGTTTGACCAAAGAAGAGCAGGAGAGCGAGCAAAAGTGGCGTACCGTCG GTACCATCCGCCGTTACATTCTGTTGATCCTGACGCTCGCGCAAACTGTCGTCGCGACCTGGTATATGAAGACCATTCTT CCTTATCAGGGTTGGGCGCTGATTAATCCTATGGATATGGTTGGTCAGGATTTGTGGGTTTCCTTTATGCAGCTTCTGCC TTATATGCTGCAAACCGGTATCCTGATCCTCTTTGCGGTACTGTTCTGTTGGGTGTCCGCCGGATTCTGGACGGCGTTAA TGGGCTTCCTGCAACTGCTTATTGGTCGCGATAAATACAGTATATCTGCGTCAACAGTTGGCGATGAACCATTAAACCCG GAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGA ATCAGTAAAAGCCACCGGGAATGCCAAACACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCG CAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATCGCCGCCGCCGTCGCCGC GTGAAGCGTAAAAGCGGTAATATCGATGACTTCTGCCGTCGCTGGGGCAGCCAGTACAGCTACATGGTGGTGCTGGATGC TGACTCGGTAATGACCGGTGATTGTTTGTGCGGGCTGGTGCGCCTGATGGAAGCCAACCCGAACGCCGGGATCATTCAGT CGTCGCCGAAAGCGTCCGGTATGGATACGCTGTATGCGCGCTGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTATTT ACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTAT CGAGCACTGCGCACTGGCTCCGCTGCCGGGCGAAGGTTCCTTTGCCGGTTCAATCCTGTCACATGACTTTGTAGAAGCGG CGTTGATGCGCCGTGCAGGTTGGGGGGTCTGGATTGCTTACGATCTCCCGGGTTCTTATGAAGAATTACCGCCTAACTTG CTTGATGAGCTAAAACGTGACCGCCGCTGGTGCCACGGTAACCTGATGAACTTCCGTCTGTTCCTGGTGAAGGGTATGCA CCCGGTTCACCGTGCGGTGTTCCTGACGGGCGTGATGTCTTATCTCTCCGCTCCGCTGTGGTTTATGTTCCTCGCGCTCT CTACTGCATTGCAGGTAGTACATGCGTTGACCGAACCGCAATACTTCCTGCAACCACGGCAGTTGTTCCCGGTGTGGCCG CAGTGGCGTCCTGAGCTGGCGATTGCACTTTTTGCTTCGACTATGGTGCTGTTGTTCCTGCCGAAGTTATTGAGCATTTT GCTTATCTGGTGCAAAGGAACGAAAGAATACGGCGGCTTCTGGCGCGTTACATTATCGTTGCTACTGGAAGTGCTTTTTT CCGTGCTGCTGGCTCCGGTACGCATGCTGTTCCATACGGTCTTCGTTGTCAGCGCGTTCCTTGGCTGGGAAGTGGTGTGG AATTCACCGCAGCGTGATGATGACTCCACTTCCTGGGGTGAAGCGTTCAAACGCCACGGCTCACAGCTGCTGTTAGGGTT AGTGTGGGCTGTTGGGATGGCGTGGCTGGATCTGCGTTTCCTGTTCTGGCTGGCACCGATTGTCTTCTCGTTGATCCTGT CACCGTTTGTTTCGGTGATTTCCAGCCGTGCCACCGTTGGTCTGCGAACCAAACGCTGGAAACTGTTCCTGATCCCGGAA GAGTATTCACCGCCGCAGGTGCTGGTTGATACCGATCGCTTCCTTGAGATGAATCGTCAACGCTCCCTTGATGATGGTTT TATGCACGCGGTGTTTAACCCGTCATTTAACGCTCTGGCAACCGCAATGGCGACCGCGCGTCACCGCGCCAGTAAGGTGC TGGAAATCGCCCGTGACCGCCACGTTGAACAGGCGCTTAACGAGACGCCAGAGAAGCTGAATCGCGATCGTCGCCTGGTG CTGCTAAGCGATCCGGTGACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAG TTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAA
Upstream 100 bases:
>100_bases GTGAAAGTGAAAGATGCCAAGAAAACCACTGAAATGCGTGCTGCGCTGGTGAATGCCGATCAGACGTTGAGTGAAACCTG GAGCTACCAGTTACCTGCCA
Downstream 100 bases:
>100_bases AAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCCACATCGTTCCTGCAATTTATTGATTTTGCAAGATTTTGTAGGT TGGGTAAGGCGTTCACGCCG
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MNKTTEYIDAMPIAASEKAALPKSDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKA MPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNP EHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRR VKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLF TAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNL LDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWP QWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVW NSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPE EYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRRLV LLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ
Sequences:
>Translated_847_residues MNKTTEYIDAMPIAASEKAALPKSDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKA MPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNP EHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRR VKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLF TAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNL LDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWP QWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVW NSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPE EYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRRLV LLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ >Mature_847_residues MNKTTEYIDAMPIAASEKAALPKSDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKA MPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNP EHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRR VKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLF TAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNL LDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWP QWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVW NSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPE EYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRRLV LLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=847, Percent_Identity=99.8819362455726, Blast_Score=1744, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 96924; Mature: 96924
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTTEYIDAMPIAASEKAALPKSDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWP CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHCC DSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLT CCCCCCCEECCCCCHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH KEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHH SFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC EHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWM CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECHHHHH ELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLV HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH RLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAI HHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE IRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNL EEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHH LDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVV HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALTEPQYFLQPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGF HHHCCCHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCH WRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHH SQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECC EYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDR CCCCCEEEECCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HVEQALNETPEKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALR HHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECC KPDAASQ CCCCCCC >Mature Secondary Structure MNKTTEYIDAMPIAASEKAALPKSDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWP CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHCC DSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLT CCCCCCCEECCCCCHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH KEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHH SFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC EHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWM CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECHHHHH ELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLV HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH RLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAI HHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE IRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNL EEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHH LDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVV HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALTEPQYFLQPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGF HHHCCCHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCH WRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHH SQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECC EYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDR CCCCCEEEECCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HVEQALNETPEKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALR HHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECC KPDAASQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]