| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187730409
Identifier: 187730409
GI number: 187730409
Start: 1957536
End: 1957820
Strand: Reverse
Name: 187730409
Synonym: SbBS512_E2151
Alternate gene names: NA
Gene position: 1957820-1957536 (Counterclockwise)
Preceding gene: 187731267
Following gene: 187730072
Centisome position: 42.41
GC content: 48.42
Gene sequence:
>285_bases GTGGCGGTGAATACCTGTCTTTCAGCTTGCTGGCTTTTTCGACAAGAGTTATTGGTGTGTCACGTTAACCGGAAAAGGGA AAAAGACATGCTGAAACAGCAGGATATGACAGAAACCGCCAGAGTGGTGTTTAATGAATTAAGCGTCACCGAACCGGCGA CAGTCGGGGAGATTGCGCAGAATACTTACCTTTCACGCGAACGCTGTCAGTTAATACTGACCCAACTTGTTATGGCGGGT CTGGCAGACTATCAGTTCGGTTGTTACAGACGCCTTCAGTCCTGA
Upstream 100 bases:
>100_bases ATGTCAGTATGTTAAGAGTGGTTACTTCGCCACACAGCTTAAACCCGCCGCGAGCGGGTTTTTTTATGGCTGAAATCGGT CCAGTACAGTAAACGTGCTG
Downstream 100 bases:
>100_bases AGGCTTTTTTATTTGTGGTAAATGGGCGGCTGGTGGGTGTTAGGGGCACCCACCAGCCATCTGCTCATGCGTTGGGTTCA CAAGCAAACCTCAGGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MAVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAG LADYQFGCYRRLQS
Sequences:
>Translated_94_residues MAVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAG LADYQFGCYRRLQS >Mature_93_residues AVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAGL ADYQFGCYRRLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10877; Mature: 10746
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQ CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH NTYLSRERCQLILTQLVMAGLADYQFGCYRRLQS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH NTYLSRERCQLILTQLVMAGLADYQFGCYRRLQS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA