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The map label for this gene is yiaG [H]

Identifier: 187730124

GI number: 187730124

Start: 3703629

End: 3703919

Strand: Reverse

Name: yiaG [H]

Synonym: SbBS512_E3971

Alternate gene names: 187730124

Gene position: 3703919-3703629 (Counterclockwise)

Preceding gene: 187730024

Following gene: 187730606

Centisome position: 80.24

GC content: 44.33

Gene sequence:

>291_bases
ATGGAATATAAAGATCCAATGCATGAGCTGTTGAGCAGCCTGGAACAGATTGTTTTTAAAGATGAAACGCAGAAAATTAC
CCTGACGCACAGAACAACGTCCTGTACCGAAATTGAGCAGTTACGAAAAGGGACAGGGTTAAAAATCGATGATTTCGCCC
GGGTTTTGGGCATATCAGTCGCCATGGTAAAGGAATGGGAATCCAGACGCGTGAAGCCTTCAAGTGCCGAACTAAAATTG
ATGCGCTTGATTCAAGCCAACCCGGCATTAAGTAAGCAGTTGATGGAATAG

Upstream 100 bases:

>100_bases
GCATGCCCTGACTTCACCCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAG
TGTGATTTGAGGAGTTTTCA

Downstream 100 bases:

>100_bases
ACTTTTATCCACTTTATTGCTGTTTACGGTCCTGATGACAGGACCGTTTTCCAACCGATTAATCATAAATATGAAAAATA
ATTGTTGCATCACCCGCCAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKL
MRLIQANPALSKQLME

Sequences:

>Translated_96_residues
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKL
MRLIQANPALSKQLME
>Mature_96_residues
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKL
MRLIQANPALSKQLME

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789978, Length=96, Percent_Identity=98.9583333333333, Blast_Score=196, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11047; Mature: 11047

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGISV
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGISV
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]