| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187730030
Identifier: 187730030
GI number: 187730030
Start: 3540754
End: 3541464
Strand: Reverse
Name: 187730030
Synonym: SbBS512_E3811
Alternate gene names: NA
Gene position: 3541464-3540754 (Counterclockwise)
Preceding gene: 187732082
Following gene: 187730614
Centisome position: 76.72
GC content: 47.12
Gene sequence:
>711_bases ATGGAATTAGTTAATACATTATTTGCAAGCCTTGCCGGTACTGATCCCTTCACAGGCGTGGATATTACGATTGCCAACTG CAAATCGGCATACTGGGATGAAGGCATTGTTCAGCAACTTATTAACCAGGCCCTGGATGAAGGGGAAAAGTTCGTCGGTG CTGACGGTCTTGAGGGATTGCTTCGATATGATGTCACATTAAATATTGGCTTAACCTCCAGCAAAGTATGGCCGGGATTT TCCCTCGATACCGCCACCATTAGCCGTCTTTGTGCCTGTGGTGCTGATTTTGGATTTGACCCCTATATCAGTGATGTACC AGATGTTCAATGTGACCTGAACACGACAAATGACGTCACCGTACAATTTACGGCGATGCTAAATCCGGATGAGCGGGTGA TAATAGCAAAGCGCCCGCTTAAAAAATGTGACTCCTGGATTGAGGATGTCTATATCTTTCAGGTCTTTAAAGATGCCTGG AAATTTCATAACAATAACAGTTTACGCGGATTTCGCGATAAGCAGGCCGCACTGAAACTCTACACGCGTCATTACTCAGT GGAAAATTGCGCAGAGGAAAGCTGTCGAGACTGCAATAGTTGCATTCGCCCCAGCTTTTCCCTTTCGCGTAGCGCCCTTA TTCGCCTGAACGCGGCGAATGCTCGTTTTGTCTATCAACCGTTTACACGCGATCAGCGGGCGAGGGGGTAA
Upstream 100 bases:
>100_bases ATTGTTGGAGTGGTTTTTAACGCCGCAGGGACAGAGTTTGGTGGAAGATGTAGGTTATGTCCCGATGTATAAGACGCTAC CTTAAAGCTGGATAATAAAA
Downstream 100 bases:
>100_bases CTATGCAACCCAGCCCCGCCATGCAGGCATTAATTGAGCAGATTTATCACACCTTTCGTCGTTATCGGGTGCCGCAGAAA TTTGTGGTTTGTTGTGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGF SLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW KFHNNNSLRGFRDKQAALKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNAANARFVYQPFTRDQRARG
Sequences:
>Translated_236_residues MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGF SLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW KFHNNNSLRGFRDKQAALKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNAANARFVYQPFTRDQRARG >Mature_236_residues MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGF SLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW KFHNNNSLRGFRDKQAALKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNAANARFVYQPFTRDQRARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26482; Mature: 26482
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGL CHHHHHHHHHHCCCCCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH LRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDVT EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEE VQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAWKFHNNNSLRGFRDKQAALKL EEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH YTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNAANARFVYQPFTRDQRARG HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCC >Mature Secondary Structure MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGL CHHHHHHHHHHCCCCCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH LRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDVT EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEE VQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAWKFHNNNSLRGFRDKQAALKL EEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH YTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNAANARFVYQPFTRDQRARG HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA